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The map label for this gene is rpfG [H]

Identifier: 74317513

GI number: 74317513

Start: 1585581

End: 1586795

Strand: Reverse

Name: rpfG [H]

Synonym: Tbd_1495

Alternate gene names: 74317513

Gene position: 1586795-1585581 (Counterclockwise)

Preceding gene: 74317514

Following gene: 74317512

Centisome position: 54.53

GC content: 65.84

Gene sequence:

>1215_bases
ATGCTAAAAAAAATCAAGGCCGCCGAGCTGCGCCCCGGCATGCACCTGCATGAATTGTGCGGCGCGTGGATGGCACACCC
GTTCTGGCGAGCCCGCTTCACCCTGACCGACCCCGAGGACATCCGACGCATACTCGACTGCGGCATCGCCGAGGTCTGGA
TCGACACCGCCAAGGGCCTCGACGTTCCGGGCGCGATTCGGGAAGCGGTCGATCCCTCGGTCACCGAAACGCTGATGGCG
GCCGGGGCCGCGCAGCACACCGAGCCGTCCACACGCGCGTCGATGAGCGAAGAGCTGCGACGTGCCGCGACGCTTTGCGC
CAAGGCCAGAAACGCCATGTTTTCCATGTTCCAGGAAGCGCGTATGGGCAAGGCCGTCAGCACCGAGAACGCCGGCGAGC
TGGTCGAGGAGATTTCGCTGTCGGTGATGCGCAACCCCGGGGCGCTCATCAGCCTCGCGCGGCTCAAGCGCGCGGACGAC
TACACCTACATGCATTGCGTCGCCGTGTGCGCGCTGATGGTCTCGCTCGCGCGGCGACTCGGCCTCGACGCCCGCGACGT
GCGCGAGGCGGGGATGGCCGGCCTGCTGCACGACCTCGGCAAGGCGCGTATGCCGGGCGAGGTCCTGAACAAGCCGGGCA
GACTTTCCGACGACGAATTCCGGATCATCCAGCGGCATCCGGTCGAAGGTCACCGCATGTTGGGCGAATGCCAGCAGGCC
AGCGACATCGTGCTCGACGTCTGCCTCCACCACCACGAAAAGGTCGACGGCAGCGGCTATCCCGACGGCCTCGGCGCCGA
CGCGATCAGCCTCTTCGCCAAAATGGGTGCGGTCTGCGACGTCTACGACGCGATCACTTCCAACCGCCCATACAAGGCCG
GCTGGTGCCCCGCCGAGTCGGTACGCAAGATGACCGAGTGGAGCCGCGGCCACTTCGACGCGCGCGTGTTCCAGGCCTTC
ATCAAATGCGTCGGCATCTATCCGATCGGCTCGCTCGTGAAGCTCGATTCCGGACGGCTCGGCGTGGTGATCGAGCAGAC
CGACAAGTCGCTGCTGGTGCCGCGGGTCAAGGCCTTCTTCTCGACCCGATCGCAGACTTACATCGTTCCCGAAGTCGTCG
ACCTCTCGCGACCCGGCGCGAACGAAAAAATCCTCGGCCACGAAGACCCGGCCAAGTGGGGGATCAAGGACCTCGACGCG
CTCTGGGCGGGCTGA

Upstream 100 bases:

>100_bases
CATCTGCGAGAGCTCGACGACGAGGCGGAAAAGTAGGGGTAGACGGCGCCGCGGCCTGCCGTAAAATGCCGCGACGATAC
CAATAAGATCCGTCGTGACA

Downstream 100 bases:

>100_bases
AGCTGCTGTGGCCTCCGGCTCAGCGGCTCCCACCGCCCGAAAGCACTGTAAAACGGCCGGGACCGTACGCCTCCCACAAC
CCCGCCCCGAATTTGCCGCA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLKKIKAAELRPGMHLHELCGAWMAHPFWRARFTLTDPEDIRRILDCGIAEVWIDTAKGLDVPGAIREAVDPSVTETLMA
AGAAQHTEPSTRASMSEELRRAATLCAKARNAMFSMFQEARMGKAVSTENAGELVEEISLSVMRNPGALISLARLKRADD
YTYMHCVAVCALMVSLARRLGLDARDVREAGMAGLLHDLGKARMPGEVLNKPGRLSDDEFRIIQRHPVEGHRMLGECQQA
SDIVLDVCLHHHEKVDGSGYPDGLGADAISLFAKMGAVCDVYDAITSNRPYKAGWCPAESVRKMTEWSRGHFDARVFQAF
IKCVGIYPIGSLVKLDSGRLGVVIEQTDKSLLVPRVKAFFSTRSQTYIVPEVVDLSRPGANEKILGHEDPAKWGIKDLDA
LWAG

Sequences:

>Translated_404_residues
MLKKIKAAELRPGMHLHELCGAWMAHPFWRARFTLTDPEDIRRILDCGIAEVWIDTAKGLDVPGAIREAVDPSVTETLMA
AGAAQHTEPSTRASMSEELRRAATLCAKARNAMFSMFQEARMGKAVSTENAGELVEEISLSVMRNPGALISLARLKRADD
YTYMHCVAVCALMVSLARRLGLDARDVREAGMAGLLHDLGKARMPGEVLNKPGRLSDDEFRIIQRHPVEGHRMLGECQQA
SDIVLDVCLHHHEKVDGSGYPDGLGADAISLFAKMGAVCDVYDAITSNRPYKAGWCPAESVRKMTEWSRGHFDARVFQAF
IKCVGIYPIGSLVKLDSGRLGVVIEQTDKSLLVPRVKAFFSTRSQTYIVPEVVDLSRPGANEKILGHEDPAKWGIKDLDA
LWAG
>Mature_404_residues
MLKKIKAAELRPGMHLHELCGAWMAHPFWRARFTLTDPEDIRRILDCGIAEVWIDTAKGLDVPGAIREAVDPSVTETLMA
AGAAQHTEPSTRASMSEELRRAATLCAKARNAMFSMFQEARMGKAVSTENAGELVEEISLSVMRNPGALISLARLKRADD
YTYMHCVAVCALMVSLARRLGLDARDVREAGMAGLLHDLGKARMPGEVLNKPGRLSDDEFRIIQRHPVEGHRMLGECQQA
SDIVLDVCLHHHEKVDGSGYPDGLGADAISLFAKMGAVCDVYDAITSNRPYKAGWCPAESVRKMTEWSRGHFDARVFQAF
IKCVGIYPIGSLVKLDSGRLGVVIEQTDKSLLVPRVKAFFSTRSQTYIVPEVVDLSRPGANEKILGHEDPAKWGIKDLDA
LWAG

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44448; Mature: 44448

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIKAAELRPGMHLHELCGAWMAHPFWRARFTLTDPEDIRRILDCGIAEVWIDTAKGL
CCCCCCHHHCCCCCHHHHHHHHHHHCHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHCCC
DVPGAIREAVDPSVTETLMAAGAAQHTEPSTRASMSEELRRAATLCAKARNAMFSMFQEA
CCCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGKAVSTENAGELVEEISLSVMRNPGALISLARLKRADDYTYMHCVAVCALMVSLARRL
HHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GLDARDVREAGMAGLLHDLGKARMPGEVLNKPGRLSDDEFRIIQRHPVEGHRMLGECQQA
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
SDIVLDVCLHHHEKVDGSGYPDGLGADAISLFAKMGAVCDVYDAITSNRPYKAGWCPAES
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VRKMTEWSRGHFDARVFQAFIKCVGIYPIGSLVKLDSGRLGVVIEQTDKSLLVPRVKAFF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHH
STRSQTYIVPEVVDLSRPGANEKILGHEDPAKWGIKDLDALWAG
HCCCCEEECHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHCC
>Mature Secondary Structure
MLKKIKAAELRPGMHLHELCGAWMAHPFWRARFTLTDPEDIRRILDCGIAEVWIDTAKGL
CCCCCCHHHCCCCCHHHHHHHHHHHCHHHHEEEECCCHHHHHHHHHCCHHHHHHHHHCCC
DVPGAIREAVDPSVTETLMAAGAAQHTEPSTRASMSEELRRAATLCAKARNAMFSMFQEA
CCCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGKAVSTENAGELVEEISLSVMRNPGALISLARLKRADDYTYMHCVAVCALMVSLARRL
HHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GLDARDVREAGMAGLLHDLGKARMPGEVLNKPGRLSDDEFRIIQRHPVEGHRMLGECQQA
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
SDIVLDVCLHHHEKVDGSGYPDGLGADAISLFAKMGAVCDVYDAITSNRPYKAGWCPAES
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VRKMTEWSRGHFDARVFQAFIKCVGIYPIGSLVKLDSGRLGVVIEQTDKSLLVPRVKAFF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHH
STRSQTYIVPEVVDLSRPGANEKILGHEDPAKWGIKDLDALWAG
HCCCCEEECHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]