Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317512

Identifier: 74317512

GI number: 74317512

Start: 1585007

End: 1585573

Strand: Reverse

Name: 74317512

Synonym: Tbd_1494

Alternate gene names: NA

Gene position: 1585573-1585007 (Counterclockwise)

Preceding gene: 74317513

Following gene: 74317511

Centisome position: 54.49

GC content: 66.31

Gene sequence:

>567_bases
GTGGCCTCCGGCTCAGCGGCTCCCACCGCCCGAAAGCACTGTAAAACGGCCGGGACCGTACGCCTCCCACAACCCCGCCC
CGAATTTGCCGCAAGTCCACAAATGGACTATATTTCAATCGAAGTTCATTCTGATCCTGGAGGGGCCGCGATGCAGCACG
CCGCCAACGCCGTCAAACCTGCGCACAAGCCTGTCGGGCGTGACCTTTCGGCCGCCGGCCTGCGCGCCTTCTTCAACATC
GCGCGCGACTGGGCGCTCAACACCGAGGCACAGATGGTGCTCCTCGGATCGCCGGGCCGCTCGACCTTCTTCAAGTGGAA
ATCCGCCCCCGAGTCGGCCGACCTCAGGCGCGACACGCTCGAGCGCCTGTCGTATCTGCTCGGTATCTACAAGGCGCTGC
AGATCCTGCTGCCCGACACCGCCGCCGCCGACGCCTGGGTCAAAAAACCCAACAGCGCGCCGCTCTTCGGCGGCAAGAGC
GCGCTCGACCGCATGCTCGGCGGCAACGTCGCCGATCTCGTCGCGGTGCGCCAGTACCTCGACGCGCAACGCGGCGGCTG
GGCTTGA

Upstream 100 bases:

>100_bases
CTCTCGCGACCCGGCGCGAACGAAAAAATCCTCGGCCACGAAGACCCGGCCAAGTGGGGGATCAAGGACCTCGACGCGCT
CTGGGCGGGCTGAAGCTGCT

Downstream 100 bases:

>100_bases
ACTACCCGACCACGCGGCTCAACTGGCCGCGGGCCTGGCGCGTTATCCCGAGCCGCTTTCCCGCCGTCGGCCTGTTCGAG
CGCGTCGCCAGCCCCGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MASGSAAPTARKHCKTAGTVRLPQPRPEFAASPQMDYISIEVHSDPGGAAMQHAANAVKPAHKPVGRDLSAAGLRAFFNI
ARDWALNTEAQMVLLGSPGRSTFFKWKSAPESADLRRDTLERLSYLLGIYKALQILLPDTAAADAWVKKPNSAPLFGGKS
ALDRMLGGNVADLVAVRQYLDAQRGGWA

Sequences:

>Translated_188_residues
MASGSAAPTARKHCKTAGTVRLPQPRPEFAASPQMDYISIEVHSDPGGAAMQHAANAVKPAHKPVGRDLSAAGLRAFFNI
ARDWALNTEAQMVLLGSPGRSTFFKWKSAPESADLRRDTLERLSYLLGIYKALQILLPDTAAADAWVKKPNSAPLFGGKS
ALDRMLGGNVADLVAVRQYLDAQRGGWA
>Mature_187_residues
ASGSAAPTARKHCKTAGTVRLPQPRPEFAASPQMDYISIEVHSDPGGAAMQHAANAVKPAHKPVGRDLSAAGLRAFFNIA
RDWALNTEAQMVLLGSPGRSTFFKWKSAPESADLRRDTLERLSYLLGIYKALQILLPDTAAADAWVKKPNSAPLFGGKSA
LDRMLGGNVADLVAVRQYLDAQRGGWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20138; Mature: 20007

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGSAAPTARKHCKTAGTVRLPQPRPEFAASPQMDYISIEVHSDPGGAAMQHAANAVKP
CCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCC
AHKPVGRDLSAAGLRAFFNIARDWALNTEAQMVLLGSPGRSTFFKWKSAPESADLRRDTL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHH
ERLSYLLGIYKALQILLPDTAAADAWVKKPNSAPLFGGKSALDRMLGGNVADLVAVRQYL
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
DAQRGGWA
HHHCCCCC
>Mature Secondary Structure 
ASGSAAPTARKHCKTAGTVRLPQPRPEFAASPQMDYISIEVHSDPGGAAMQHAANAVKP
CCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCC
AHKPVGRDLSAAGLRAFFNIARDWALNTEAQMVLLGSPGRSTFFKWKSAPESADLRRDTL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHH
ERLSYLLGIYKALQILLPDTAAADAWVKKPNSAPLFGGKSALDRMLGGNVADLVAVRQYL
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
DAQRGGWA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]