Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317365

Identifier: 74317365

GI number: 74317365

Start: 1427663

End: 1428100

Strand: Reverse

Name: 74317365

Synonym: Tbd_1347

Alternate gene names: NA

Gene position: 1428100-1427663 (Counterclockwise)

Preceding gene: 74317366

Following gene: 74317364

Centisome position: 49.08

GC content: 66.67

Gene sequence:

>438_bases
ATGATTGAAAAACACCGCCGCCGCAAGCAGCCGCGCAGTCACCCGCACTTCGTGTGGGCCGATCCCGATCAGTTCCACGT
CGAGCGTCTGACGGCCGGCCTGACGCAGAAATCGGCCGCCGAATACCTCGGCGTCTCGCTGCGCACCGTGCGCAACTGGG
AGACCGGCTGCAACCGCATCCCCTACCCGGCTTTCAAGCTCGTCAGGATGCGCGCGAAGGCCATCGTCCACGTCGAGGGG
TGGGACGGCTGGCGTTTCGACCGTGACGGCGCTTTGGTGACGCCGGAGGGCTACGCGTTTCAGCCGTGGGAGATTCAGCA
GCTTCGTCTGGTCGTCGGGCTCGCTCGCCGTTACGTGGAAGGGCGTTACGTGGCGGCTGCGCCTGCGGCCCTGCCCGCCT
TCGCGGAAAAGGTGCCAGTGCTGCGGAGGGTCGCATGA

Upstream 100 bases:

>100_bases
CGCCCTTACGTTGGGCCGGACTTCGACCCCGACGACATCGACTTCGGCCTTCCGGCCGACCTCGAGGGCGTTCCGGCCGA
GCTTCTGACGGGGGGCCGCG

Downstream 100 bases:

>100_bases
GCGCCCGGAAGGCAGGCGGCAACGCCACGCGGCAGCGCGTCAGCGCGACGCGGCGGCGTGACGCTGCCCCAATGGCTGCA
TTCCGCGAGATTCCGCGCAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRIPYPAFKLVRMRAKAIVHVEG
WDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVEGRYVAAAPAALPAFAEKVPVLRRVA

Sequences:

>Translated_145_residues
MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRIPYPAFKLVRMRAKAIVHVEG
WDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVEGRYVAAAPAALPAFAEKVPVLRRVA
>Mature_145_residues
MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRIPYPAFKLVRMRAKAIVHVEG
WDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVEGRYVAAAPAALPAFAEKVPVLRRVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16730; Mature: 16730

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRI
CCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCCC
PYPAFKLVRMRAKAIVHVEGWDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVE
CCHHHHHHHHHHHEEEEEECCCCCEECCCCCEECCCCCEECCCHHHHHHHHHHHHHHHHC
GRYVAAAPAALPAFAEKVPVLRRVA
CCEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEKHRRRKQPRSHPHFVWADPDQFHVERLTAGLTQKSAAEYLGVSLRTVRNWETGCNRI
CCCCHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCCC
PYPAFKLVRMRAKAIVHVEGWDGWRFDRDGALVTPEGYAFQPWEIQQLRLVVGLARRYVE
CCHHHHHHHHHHHEEEEEECCCCCEECCCCCEECCCCCEECCCHHHHHHHHHHHHHHHHC
GRYVAAAPAALPAFAEKVPVLRRVA
CCEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA