Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317315

Identifier: 74317315

GI number: 74317315

Start: 1369454

End: 1369990

Strand: Direct

Name: 74317315

Synonym: Tbd_1297

Alternate gene names: NA

Gene position: 1369454-1369990 (Clockwise)

Preceding gene: 74317314

Following gene: 74317316

Centisome position: 47.06

GC content: 70.58

Gene sequence:

>537_bases
ATGCGTGAACTGAAGATCGATTTCGCAGACACCCGCCGCTTGCCGCGCAGCGTGACGCTCGCGCTGCTCGCGGTGTCGCT
CGCGCTCGCTGCCACCGCCGTCGACGCCTACCGCGACGCGCGTGCTGCGCTCGACTACTGGCATGACGAAGTCGCGCAAC
GCCAGGCCGCGAGCAGCCGGGCGGCGCGGACGCCGGCGCCGGCGCGCGGCGTGGACAAAGCCGCTGCGGCGGAGCTTGCG
CAGGCCCACGAGATCGCCGCGCAGCTCGCGCTGCCATGGGATCCGCTGTTTCGCGCGGTCGAAGCGGCGACGCCTGCGGA
CATCGCACTGCTCGGCGTCGAGCCGAACGCGCAGAAACGCAACCTCAGGCTGGTCGGGGAGGGCAAGGACATCCATGCGG
TCCTCGGGTATGTGCGACAGCTCGAAGCGCAGCCGCTGCTTCGCGACGTCTATCTGCTCGACCACGGCACGTCCGACGCC
GACCCGCAACGGCCGGCGCGTTTCGTCATCGAGGCGGCGTGGGGAAGCGGATCATGA

Upstream 100 bases:

>100_bases
GCCGAGGACGAGCCGGTGCACGCGCTGACCGTCGCCGACGCCGCGCGCTTCGGCGCCGCCCGCCACCGCGCCCACGCGCT
CTCGCTTTTCGGAGGCGACG

Downstream 100 bases:

>100_bases
TGGCGGCGCTATCCCTGTTGCGCCGTGCCGAGCGCGCCATCGGCCGCAGCGGCCTTGGCGCGCTGCTCGTGCTTGCCGGC
GCAGCGGCCTTCCACCTGCT

Product: transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSRAARTPAPARGVDKAAAAELA
QAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKRNLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDA
DPQRPARFVIEAAWGSGS

Sequences:

>Translated_178_residues
MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSRAARTPAPARGVDKAAAAELA
QAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKRNLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDA
DPQRPARFVIEAAWGSGS
>Mature_178_residues
MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSRAARTPAPARGVDKAAAAELA
QAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKRNLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDA
DPQRPARFVIEAAWGSGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19206; Mature: 19206

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSR
CCCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARTPAPARGVDKAAAAELAQAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
NLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDADPQRPARFVIEAAWGSGS
CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRELKIDFADTRRLPRSVTLALLAVSLALAATAVDAYRDARAALDYWHDEVAQRQAASSR
CCCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARTPAPARGVDKAAAAELAQAHEIAAQLALPWDPLFRAVEAATPADIALLGVEPNAQKR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
NLRLVGEGKDIHAVLGYVRQLEAQPLLRDVYLLDHGTSDADPQRPARFVIEAAWGSGS
CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA