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The map label for this gene is flhD [H]

Identifier: 74317258

GI number: 74317258

Start: 1302719

End: 1303033

Strand: Direct

Name: flhD [H]

Synonym: Tbd_1240

Alternate gene names: 74317258

Gene position: 1302719-1303033 (Clockwise)

Preceding gene: 74317257

Following gene: 74317259

Centisome position: 44.77

GC content: 58.41

Gene sequence:

>315_bases
ATGAAAATGGACGAAATGCTCGACGAGATGCGTGACGTCAATCTCAACTACCTGATGCTGGCGCAGAACATGATTCAGCA
CGACAAGGCGACCGCCGTTTTTCGCCTTGGCATCAGCCAGGACGTCGCCGACCTGATCGAGAACCTGACTCCCGCCCAGA
TCCTCAAGCTCGCCAGCTCGGGAATGCTCGTGTCGCGCTTCCGTTTCGACGACGGCATGGTGCTCAATCTGCTCACCAAT
TACACCAAGGATCGCGCGCTCGCTCAGTCGCACGCTGCCATTCTGATGGCCGGCCAGGCGATGGCAACGGTCTGA

Upstream 100 bases:

>100_bases
CGCTTTTCTTTATTAACTTTCCGGGGTCGCGTCCGAAAACGAATTCACCACGCCGACTTGAGCGTGAGTTCGAAAAAAAT
CGAGACGCGGAGACAGACCG

Downstream 100 bases:

>100_bases
GTAGCGGCATCGAGGAGCGCGGGGATGAGCAAGAAAAGCCTGTTGACCGAAATGCGCGACACCCAGCTCGCGATCGAACT
GATCGAACTCGGTGCCCGTC

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKMDEMLDEMRDVNLNYLMLAQNMIQHDKATAVFRLGISQDVADLIENLTPAQILKLASSGMLVSRFRFDDGMVLNLLTN
YTKDRALAQSHAAILMAGQAMATV

Sequences:

>Translated_104_residues
MKMDEMLDEMRDVNLNYLMLAQNMIQHDKATAVFRLGISQDVADLIENLTPAQILKLASSGMLVSRFRFDDGMVLNLLTN
YTKDRALAQSHAAILMAGQAMATV
>Mature_104_residues
MKMDEMLDEMRDVNLNYLMLAQNMIQHDKATAVFRLGISQDVADLIENLTPAQILKLASSGMLVSRFRFDDGMVLNLLTN
YTKDRALAQSHAAILMAGQAMATV

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=97, Percent_Identity=41.2371134020619, Blast_Score=79, Evalue=7e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 11591; Mature: 11591

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.6 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
9.6 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMDEMLDEMRDVNLNYLMLAQNMIQHDKATAVFRLGISQDVADLIENLTPAQILKLASS
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCC
GMLVSRFRFDDGMVLNLLTNYTKDRALAQSHAAILMAGQAMATV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MKMDEMLDEMRDVNLNYLMLAQNMIQHDKATAVFRLGISQDVADLIENLTPAQILKLASS
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCC
GMLVSRFRFDDGMVLNLLTNYTKDRALAQSHAAILMAGQAMATV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA