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The map label for this gene is ycgB [H]

Identifier: 74317252

GI number: 74317252

Start: 1294102

End: 1295631

Strand: Direct

Name: ycgB [H]

Synonym: Tbd_1234

Alternate gene names: 74317252

Gene position: 1294102-1295631 (Clockwise)

Preceding gene: 74317251

Following gene: 74317254

Centisome position: 44.47

GC content: 61.76

Gene sequence:

>1530_bases
ATGGAAGCAGAAACCGAGCACGCCGCCCCGATCGATTCCGTCCGCAAGCCGCTCTCCGAGGGCTCGGAATGGACCTTCGA
GCTCCTCGACCTCTACGATCACGAAATCGCCCGGGTCGCCGAACACTACGGCCTCGACACCTATCCCAAGCAGATCGAGG
TCATCACGTCCGAGCAGATGATCGACGCGTATTCGTCGGTCGGGATGCCCGTCGGTTACCACCACTGGTCCTACGGCAAG
CATTTCCTCTCGACACAGAAGAGCTACAAGCGCGGCCAGATGGGACTGGCCTACGAAATCGTCATCAACTCCAACCCCTG
CATCGCCTATCTCATGGAAGAGAACACCATGACGATGCAGGCGCTCGTGATCGCTCACGCGGCGTATGGCCACAATTCCT
TCTTCAAGGGCAATTACCTGTTCCGCACCTGGACCGACGCCGAGGGCATTCTCGACTACCTGGTCTTCGCGCGAAACTTC
ATCGCCGAATGCGAGCAGCGCTATGGCGAGACGGCGGTCGAGGAGTTGCTCGACTCCTGTCACGCCCTGATGAACCTCGG
CGTCGACCGCTACAAGCGGCCAGCCAAGCTCTCGATGGCCAAGGAGCAGGCGCGCCAGCTCGAACGGGAAGCCTATCTGC
AGTCGCAGGTCAACGACCTATGGCGCACGCTGCCGAGCAAGCAGACGGTCGATCGGGCAGAGCAGACGCGCCGCTTTCCG
AGCGAGCCGCAGGAAAATCTGCTCTATTTCATCGAAAAAAATGCGCCGCGCCTCGAGCCCTGGCAGCGCGAGGTCGTGCG
GATCGTGCGAAAGATTGCGCAATATTTCTACCCGCAGCGGCAGACCCAGGTCATGAACGAGGGCTGGGCGACCTTCTGGC
ATTACACCCTGCTCAATCACCTGTACGAGGAGGGCAAGCTGACCGACGGCTTCATGATCGAGTTTCTGCAGAGCCACACC
AACGTGATCTACCAGCCGCCCTACAACAGCCGCCACTACAGCGGCATTAATCCCTACACACTCGGGTTCGCGATGTTCCA
GGACCTGCGGCGCATCTGCGAGCACCCAACGGAGGAAGACCGCCGCTGGTTCCCGGAGCTCGCCGGGGCCGACGGGGTGA
AGGCGCTCGATTTCGCGATGCGCAACTTCAAGGACGAAAGCTTCATCGCGCAATACCTCTCGCCCAAGCTGATTCGCGAT
CTCAAGCTGTTCGCGCTGGTCGACGACGAGCGCGACGAACAGCTTGAAGTCGCCGCGATCCATGACGATGCCGGCTACCG
GACCGTGCGCCAGCTGCTCGCCGAGCAGTACAACCTCGGCAGCCGCGAGCCCAATATCCAGATCTACGAGGTCGACGTCT
TCGGCGACCGCTCGCTGACCCTGCGCCACTACATGCACGACCGCCGCCCGCTCGGCGACTCGACCCCGGAAATGCTTCGC
CATGTCGCGCGGCTCTGGGGCTACAAGGTGAGGATGGAAAACGTCGACCAGGACGGCATCGTCCGCCTCGTCGGCGTGAG
CGAGGCCTGA

Upstream 100 bases:

>100_bases
GTGAAGGCGGCGAGCCCACGCTTTGCGATGCAGCGCATCCTTGCGCTCGAAGACATCTACCCGGTGTTCCGCGAATTGTT
CAGGAAGAAGGCCGCTTGAT

Downstream 100 bases:

>100_bases
GGCGGGGCGTTACCCGATCTCGGCGTCCCCGGCCTGCCCGAGGTCGACCGGTTCCAGGGCGGCGAGTGCCGGCCCCTCGA
TCACGCTGCCGTCGGTGCCG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MEAETEHAAPIDSVRKPLSEGSEWTFELLDLYDHEIARVAEHYGLDTYPKQIEVITSEQMIDAYSSVGMPVGYHHWSYGK
HFLSTQKSYKRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKGNYLFRTWTDAEGILDYLVFARNF
IAECEQRYGETAVEELLDSCHALMNLGVDRYKRPAKLSMAKEQARQLEREAYLQSQVNDLWRTLPSKQTVDRAEQTRRFP
SEPQENLLYFIEKNAPRLEPWQREVVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLLNHLYEEGKLTDGFMIEFLQSHT
NVIYQPPYNSRHYSGINPYTLGFAMFQDLRRICEHPTEEDRRWFPELAGADGVKALDFAMRNFKDESFIAQYLSPKLIRD
LKLFALVDDERDEQLEVAAIHDDAGYRTVRQLLAEQYNLGSREPNIQIYEVDVFGDRSLTLRHYMHDRRPLGDSTPEMLR
HVARLWGYKVRMENVDQDGIVRLVGVSEA

Sequences:

>Translated_509_residues
MEAETEHAAPIDSVRKPLSEGSEWTFELLDLYDHEIARVAEHYGLDTYPKQIEVITSEQMIDAYSSVGMPVGYHHWSYGK
HFLSTQKSYKRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKGNYLFRTWTDAEGILDYLVFARNF
IAECEQRYGETAVEELLDSCHALMNLGVDRYKRPAKLSMAKEQARQLEREAYLQSQVNDLWRTLPSKQTVDRAEQTRRFP
SEPQENLLYFIEKNAPRLEPWQREVVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLLNHLYEEGKLTDGFMIEFLQSHT
NVIYQPPYNSRHYSGINPYTLGFAMFQDLRRICEHPTEEDRRWFPELAGADGVKALDFAMRNFKDESFIAQYLSPKLIRD
LKLFALVDDERDEQLEVAAIHDDAGYRTVRQLLAEQYNLGSREPNIQIYEVDVFGDRSLTLRHYMHDRRPLGDSTPEMLR
HVARLWGYKVRMENVDQDGIVRLVGVSEA
>Mature_509_residues
MEAETEHAAPIDSVRKPLSEGSEWTFELLDLYDHEIARVAEHYGLDTYPKQIEVITSEQMIDAYSSVGMPVGYHHWSYGK
HFLSTQKSYKRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKGNYLFRTWTDAEGILDYLVFARNF
IAECEQRYGETAVEELLDSCHALMNLGVDRYKRPAKLSMAKEQARQLEREAYLQSQVNDLWRTLPSKQTVDRAEQTRRFP
SEPQENLLYFIEKNAPRLEPWQREVVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLLNHLYEEGKLTDGFMIEFLQSHT
NVIYQPPYNSRHYSGINPYTLGFAMFQDLRRICEHPTEEDRRWFPELAGADGVKALDFAMRNFKDESFIAQYLSPKLIRD
LKLFALVDDERDEQLEVAAIHDDAGYRTVRQLLAEQYNLGSREPNIQIYEVDVFGDRSLTLRHYMHDRRPLGDSTPEMLR
HVARLWGYKVRMENVDQDGIVRLVGVSEA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=499, Percent_Identity=67.1342685370741, Blast_Score=729, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59556; Mature: 59556

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAETEHAAPIDSVRKPLSEGSEWTFELLDLYDHEIARVAEHYGLDTYPKQIEVITSEQM
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
IDAYSSVGMPVGYHHWSYGKHFLSTQKSYKRGQMGLAYEIVINSNPCIAYLMEENTMTMQ
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHH
ALVIAHAAYGHNSFFKGNYLFRTWTDAEGILDYLVFARNFIAECEQRYGETAVEELLDSC
HHHHHHHHHCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
HALMNLGVDRYKRPAKLSMAKEQARQLEREAYLQSQVNDLWRTLPSKQTVDRAEQTRRFP
HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
SEPQENLLYFIEKNAPRLEPWQREVVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLLNH
CCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYEEGKLTDGFMIEFLQSHTNVIYQPPYNSRHYSGINPYTLGFAMFQDLRRICEHPTEED
HHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
RRWFPELAGADGVKALDFAMRNFKDESFIAQYLSPKLIRDLKLFALVDDERDEQLEVAAI
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHEEEECCCCCCCEEEEEE
HDDAGYRTVRQLLAEQYNLGSREPNIQIYEVDVFGDRSLTLRHYMHDRRPLGDSTPEMLR
ECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHH
HVARLWGYKVRMENVDQDGIVRLVGVSEA
HHHHHHCCEEEECCCCCCCCEEEEECCCC
>Mature Secondary Structure
MEAETEHAAPIDSVRKPLSEGSEWTFELLDLYDHEIARVAEHYGLDTYPKQIEVITSEQM
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
IDAYSSVGMPVGYHHWSYGKHFLSTQKSYKRGQMGLAYEIVINSNPCIAYLMEENTMTMQ
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHH
ALVIAHAAYGHNSFFKGNYLFRTWTDAEGILDYLVFARNFIAECEQRYGETAVEELLDSC
HHHHHHHHHCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
HALMNLGVDRYKRPAKLSMAKEQARQLEREAYLQSQVNDLWRTLPSKQTVDRAEQTRRFP
HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
SEPQENLLYFIEKNAPRLEPWQREVVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLLNH
CCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYEEGKLTDGFMIEFLQSHTNVIYQPPYNSRHYSGINPYTLGFAMFQDLRRICEHPTEED
HHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
RRWFPELAGADGVKALDFAMRNFKDESFIAQYLSPKLIRDLKLFALVDDERDEQLEVAAI
HHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHEEEECCCCCCCEEEEEE
HDDAGYRTVRQLLAEQYNLGSREPNIQIYEVDVFGDRSLTLRHYMHDRRPLGDSTPEMLR
ECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHH
HVARLWGYKVRMENVDQDGIVRLVGVSEA
HHHHHHCCEEEECCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]