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The map label for this gene is clpS [H]

Identifier: 74317254

GI number: 74317254

Start: 1297355

End: 1297663

Strand: Direct

Name: clpS [H]

Synonym: Tbd_1236

Alternate gene names: 74317254

Gene position: 1297355-1297663 (Clockwise)

Preceding gene: 74317252

Following gene: 74317255

Centisome position: 44.59

GC content: 55.66

Gene sequence:

>309_bases
ATGGCAACCAAGCGAGAAGGCTCTACCCTACTGGAACCGGCAGCGGCCAAGGTAAAGCCTCCGCCGCTGTACAAGGTACT
GCTCTTGAACGACGACTACACCCCCATGGAATTCGTCGTTCACGTGCTCAGAAAGTTTTTTGGCATCGACGAAGAACGGG
CGACACAAATCATGCTCAAAGTGCATACTGAGGGTGTCGGGGTTTGCGGTGTGTTCACGCGGGATATCGCGCATACCAAG
GTCGAGCAGGTTGTGGATTTCGCGCGGCAGCATCAGCACCCGCTGCAGTGCACGATGGAGGAAACTTAG

Upstream 100 bases:

>100_bases
GCGGAGAGCGTCGCCGAAGTCGGCGGCCCTACTGTCAGCAGGCTTGAAAAATCCCCGCGTCGGCTCAAAATAAAGCCAGT
AATCAAGGCATATTCGGGCT

Downstream 100 bases:

>100_bases
ATGATTGCCCAAGAACTTGAAGTCTCGCTGCACATGGCCTTCATGGATGCGCGGCAGAAGCGCCACGAGTTCATTTCGGT
GGAACATCTGCTGATGGCGA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MATKREGSTLLEPAAAKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLKVHTEGVGVCGVFTRDIAHTK
VEQVVDFARQHQHPLQCTMEET

Sequences:

>Translated_102_residues
MATKREGSTLLEPAAAKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLKVHTEGVGVCGVFTRDIAHTK
VEQVVDFARQHQHPLQCTMEET
>Mature_101_residues
ATKREGSTLLEPAAAKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLKVHTEGVGVCGVFTRDIAHTKV
EQVVDFARQHQHPLQCTMEET

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=85, Percent_Identity=60, Blast_Score=119, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11578; Mature: 11446

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKREGSTLLEPAAAKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLK
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHEEHEE
VHTEGVGVCGVFTRDIAHTKVEQVVDFARQHQHPLQCTMEET
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
>Mature Secondary Structure 
ATKREGSTLLEPAAAKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLK
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHEEHEE
VHTEGVGVCGVFTRDIAHTKVEQVVDFARQHQHPLQCTMEET
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA