Click here to switch to the map view.

The map label for this gene is yeaH [C]

Identifier: 74317251

GI number: 74317251

Start: 1292841

End: 1294100

Strand: Direct

Name: yeaH [C]

Synonym: Tbd_1233

Alternate gene names: 74317251

Gene position: 1292841-1294100 (Clockwise)

Preceding gene: 74317250

Following gene: 74317252

Centisome position: 44.43

GC content: 64.76

Gene sequence:

>1260_bases
ATGAGTCAACTCGTCGACCGCCGGCTTTCGGGCAAGAACCGCAGCGCTGTCAACCGCCAGCGCTTCCTGCGCCGTTTCAA
GGCGCAGATCCGCAAGGCAGCGGCGCAGGCCGTGTCGGGACGGAAAGTCGCCGATCTCGAGCGCGGCGAGAAGATTTCGA
TCCCGTCGAAGGACCTCTCGGAACCGATCTTCCACCACGGTCCCGGCGGTCGCCGCAACGTCATCCTGCCCGGCAACCGC
GAGTTCGTCAGCGGCGACCGCATCGACCGTCCCGCGGGCGAGGGCGGCGGCGGAAGCGGCGGATCGCCTGACGGCGAGGG
CATGGACGACTTCGTCTTCGAGCTCTCGAAAGAAGAGTTCATGGACTACTTTTTTGAAGACCTCGCCCTGCCCGACATGG
TGAAGAAGCAGCTCGCGGCCGTGCCCGAGGTGAAGAAGTCGCGGGCAGGCTTCGTCAGCCACGGCAACCCGGCCAATCTG
CACGTCGTGCGCTCGATGAAGCAGGCGATCGGCCGTCGCCTGGCGATGGCCGCCGGCCCGCGCGAGGCGCTGCGGCAGGC
GGAAGAAGCCCTCGAGGCGCTCGTCGCCGAGGGCCGAGGCGCGGAACCCGACGCCGAGGCCTTACGCGAGGAGATCGCAG
CGCTCAAGGCGCGCGTTGCGGCCGTGCCTTTCATCGACACCTGGGATCTGCGCTATGCGCATCGCGTCGACCAGCCGGTG
CCGAGCAGCCAGGCCGTGATGTTCTGTCTGCTCGACGTGTCGGGGTCGATGGACGAAGACCGCAAGAACATCGCCAAGCG
CTTCTTCATGCTGCTCTATCTTTTTCTGACCAAGAGCTACGAGCGGATCGACGTGGTCTTCATCCGTCATCACACCGTCG
CCAAGGAAGTCGACGAGGAGGAGTTCTTTTCCTCACGCGAGAGCGGCGGCACCGTCGTGTCGAGTGCGCTCGAATTGATG
CGAGACATCATCCTCGCGCGCTATCCGACCTCGAACTGGAACATCTACGCCGCGCAGGCGTCAGATGGCGACAACTGGGA
CGACGACTCGCCACGCTGCCGTGACCTGCTGCTGCAGAGCATCCTGCCGCTGACCCAGTATTTCGCCTACGTCGAGATCG
AGGCAGAGGAGCCGCAGAGCCTGTGGCGCGAGTACGAGCGCGTGAAGGCGGCGAGCCCACGCTTTGCGATGCAGCGCATC
CTTGCGCTCGAAGACATCTACCCGGTGTTCCGCGAATTGTTCAGGAAGAAGGCCGCTTGA

Upstream 100 bases:

>100_bases
GTCCAGCGCATGGTGGCGAAGGGCTACACCGAGAAGCAGGTGCGCCTGCTCGCCGAGTGGTACCTACGGGCGAGGAAAAC
CTCCTGACGGGGATGCCACC

Downstream 100 bases:

>100_bases
TATGGAAGCAGAAACCGAGCACGCCGCCCCGATCGATTCCGTCCGCAAGCCGCTCTCCGAGGGCTCGGAATGGACCTTCG
AGCTCCTCGACCTCTACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSQLVDRRLSGKNRSAVNRQRFLRRFKAQIRKAAAQAVSGRKVADLERGEKISIPSKDLSEPIFHHGPGGRRNVILPGNR
EFVSGDRIDRPAGEGGGGSGGSPDGEGMDDFVFELSKEEFMDYFFEDLALPDMVKKQLAAVPEVKKSRAGFVSHGNPANL
HVVRSMKQAIGRRLAMAAGPREALRQAEEALEALVAEGRGAEPDAEALREEIAALKARVAAVPFIDTWDLRYAHRVDQPV
PSSQAVMFCLLDVSGSMDEDRKNIAKRFFMLLYLFLTKSYERIDVVFIRHHTVAKEVDEEEFFSSRESGGTVVSSALELM
RDIILARYPTSNWNIYAAQASDGDNWDDDSPRCRDLLLQSILPLTQYFAYVEIEAEEPQSLWREYERVKAASPRFAMQRI
LALEDIYPVFRELFRKKAA

Sequences:

>Translated_419_residues
MSQLVDRRLSGKNRSAVNRQRFLRRFKAQIRKAAAQAVSGRKVADLERGEKISIPSKDLSEPIFHHGPGGRRNVILPGNR
EFVSGDRIDRPAGEGGGGSGGSPDGEGMDDFVFELSKEEFMDYFFEDLALPDMVKKQLAAVPEVKKSRAGFVSHGNPANL
HVVRSMKQAIGRRLAMAAGPREALRQAEEALEALVAEGRGAEPDAEALREEIAALKARVAAVPFIDTWDLRYAHRVDQPV
PSSQAVMFCLLDVSGSMDEDRKNIAKRFFMLLYLFLTKSYERIDVVFIRHHTVAKEVDEEEFFSSRESGGTVVSSALELM
RDIILARYPTSNWNIYAAQASDGDNWDDDSPRCRDLLLQSILPLTQYFAYVEIEAEEPQSLWREYERVKAASPRFAMQRI
LALEDIYPVFRELFRKKAA
>Mature_418_residues
SQLVDRRLSGKNRSAVNRQRFLRRFKAQIRKAAAQAVSGRKVADLERGEKISIPSKDLSEPIFHHGPGGRRNVILPGNRE
FVSGDRIDRPAGEGGGGSGGSPDGEGMDDFVFELSKEEFMDYFFEDLALPDMVKKQLAAVPEVKKSRAGFVSHGNPANLH
VVRSMKQAIGRRLAMAAGPREALRQAEEALEALVAEGRGAEPDAEALREEIAALKARVAAVPFIDTWDLRYAHRVDQPVP
SSQAVMFCLLDVSGSMDEDRKNIAKRFFMLLYLFLTKSYERIDVVFIRHHTVAKEVDEEEFFSSRESGGTVVSSALELMR
DIILARYPTSNWNIYAAQASDGDNWDDDSPRCRDLLLQSILPLTQYFAYVEIEAEEPQSLWREYERVKAASPRFAMQRIL
ALEDIYPVFRELFRKKAA

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family

Homologues:

Organism=Escherichia coli, GI1788084, Length=424, Percent_Identity=54.2452830188679, Blast_Score=481, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1233_THIDA (Q3SJH5)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_314991.1
- STRING:   Q3SJH5
- GeneID:   3673323
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_1233
- NMPDR:   fig|292415.3.peg.1253
- eggNOG:   COG2718
- HOGENOM:   HBG313798
- OMA:   AINATHA
- PhylomeDB:   Q3SJH5
- ProtClustDB:   PRK05325
- BioCyc:   TDEN292415:TBD_1233-MONOMER
- HAMAP:   MF_01232
- InterPro:   IPR006698

Pfam domain/function: PF04285 DUF444

EC number: NA

Molecular weight: Translated: 47156; Mature: 47025

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLVDRRLSGKNRSAVNRQRFLRRFKAQIRKAAAQAVSGRKVADLERGEKISIPSKDLS
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHC
EPIFHHGPGGRRNVILPGNREFVSGDRIDRPAGEGGGGSGGSPDGEGMDDFVFELSKEEF
CCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
MDYFFEDLALPDMVKKQLAAVPEVKKSRAGFVSHGNPANLHVVRSMKQAIGRRLAMAAGP
HHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
REALRQAEEALEALVAEGRGAEPDAEALREEIAALKARVAAVPFIDTWDLRYAHRVDQPV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC
PSSQAVMFCLLDVSGSMDEDRKNIAKRFFMLLYLFLTKSYERIDVVFIRHHTVAKEVDEE
CCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCHH
EFFSSRESGGTVVSSALELMRDIILARYPTSNWNIYAAQASDGDNWDDDSPRCRDLLLQS
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
ILPLTQYFAYVEIEAEEPQSLWREYERVKAASPRFAMQRILALEDIYPVFRELFRKKAA
HHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQLVDRRLSGKNRSAVNRQRFLRRFKAQIRKAAAQAVSGRKVADLERGEKISIPSKDLS
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHC
EPIFHHGPGGRRNVILPGNREFVSGDRIDRPAGEGGGGSGGSPDGEGMDDFVFELSKEEF
CCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
MDYFFEDLALPDMVKKQLAAVPEVKKSRAGFVSHGNPANLHVVRSMKQAIGRRLAMAAGP
HHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
REALRQAEEALEALVAEGRGAEPDAEALREEIAALKARVAAVPFIDTWDLRYAHRVDQPV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC
PSSQAVMFCLLDVSGSMDEDRKNIAKRFFMLLYLFLTKSYERIDVVFIRHHTVAKEVDEE
CCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCHH
EFFSSRESGGTVVSSALELMRDIILARYPTSNWNIYAAQASDGDNWDDDSPRCRDLLLQS
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
ILPLTQYFAYVEIEAEEPQSLWREYERVKAASPRFAMQRILALEDIYPVFRELFRKKAA
HHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA