| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yeaG [H]
Identifier: 74317250
GI number: 74317250
Start: 1290908
End: 1292827
Strand: Direct
Name: yeaG [H]
Synonym: Tbd_1232
Alternate gene names: 74317250
Gene position: 1290908-1292827 (Clockwise)
Preceding gene: 74317247
Following gene: 74317251
Centisome position: 44.36
GC content: 60.52
Gene sequence:
>1920_bases ATGAGCTTGTTCAATCAGTACATCGAACGTTACCGCCGCGAGGAAGAGGAATATTCCCTCGAGGAATTCCTCGCGATCTG CAAGAAGGATCCGCTCGCGTACGCCAGTTCGGCCGAGCGCCTGCTGGCGGCGATCGGCGAACCCGAACTGGTCGACACCC GTCAGGACCCGCGGCTGTCGCGGCTGTTCTCGAACAAGGTCATCAAGCGCTACCCGGCGTTCAAGGATTTCTTCGGCATG GAAGAGACGATCGAGCAGATCGTTTCGTACTTTCGCCATGCGGCGCAGGGGCTCGAGGAGAAGAAGCAGATTCTCTACCT GCTCGGGCCGGTCGGCGGCGGCAAGTCTTCGCTGGCCGAAAAGCTCAAGCATCTGATGGAGAAGGCACCGTTCTACGCGA TCAAGGGATCGCCCGTGAACGACTCGCCGCTTTCGCTGTTTTCGGCCGACGAGGACGGCGACATCCTCGAGCAGGAGTAC GGCATCCCACGCCGCTACCTCGGCAGGGTTCTGTCGCCGTGGGCGGTCAAGCGCCTGCACGAATACAACGGCGACATCAC GAAATTCCGCGTCGTCAAGCGCTGGCCCTCGGTGCTGGGTCAGGTCGCGATTTCGAAGACCGAGCCGGGCGACGAGAACA ATCAGGACATTTCGTCGCTGGTCGGCAAGGTCGACATCCGCAAGCTCGAGAAATACTCTCAGGACGACCCTGATGCCTAC AGCTACTCGGGCGGACTATGCCTGGCGAACCAGGGTCTGATGGAGTTCGTCGAAATGTTCAAGGCGCCGATCAAGGTCCT GCATCCCTTGCTGACGGCGACCCAGGAAGGCAACTACAAGGGCACCGAAGGCTTCGGTGCGATTCCGTTCGACGGCGTCG TGCTCGCGCACAGCAACGAAAGCGAATGGACGGCCTTCCGTAACAACAAGAACAACGAGGCTTTCCTCGACCGCATCTAT ATCGTCAAGGTCCCGTACTGCCTGCGCGTGTCGGAAGAGGTCAAGATCTACCGCAAGCTGCTGCAGCACAGCTCGCTGTC GGAATCACCGTGCGCGCCGGGCACGCTCGAGATGCTCGCCCAGTTCGCGGTACTGACGCGCCTCAAGGAGCCCGAGAACT CGAGCATCTATTCCAAAATGCGGGTCTACGACGGCGAGAACCTCAAGGACACCGACCCCAAGGCGAAGAGCTATCAGGAA TACCGCGACTTCGCGGGCGTCGACGAGGGGATGACCGGGGTCTCGACGCGCTTCGCGTTCAAGATACTATCGCGCGTGTT CAACTTCGACCACAGCGAGATCGCGGCCAACCCGGTGCACCTGCTCTACGTCCTCGAGCAGCAGATCGAGCAGGAACAAC TGCCGCCCGAGTCCGAGCAGCGCTACGTCGCCTATCTCAAGGAATATCTCGCACCGCATTACGCCGAGTACATCGAGAAG GAACTGCAGACCGCCTACCTCGAGTCGTATTCGGAGTATGGGCAGAACATCTTCGACCGCTACGTGACCTACGCCGACAT GTGGATTCAGGATCAGGAGTTCCGCGATCCCGACACCGGCGAGATCCTCGACCGCGGCCAGCTCAATACCGAGCTCGAGA AAATCGAGAAGCCGGCGGGAATCGCCAATCCCAAGGACTTCCGCCACGAGGTCGTCAACTTCGTGCTGCGGGCGCGCGCG CAGAACCATGGCAAGAATCCCGCGTGGACGAGCTACGAGAAGCTGCGCGCGGTCATCGAGAAGCGCATGTTCTCGAGCAC CGAGGACCTGCTGCCGGTGATTTCCTTCAACGCCAAGGCGTCGAGCGAGGAACAGAAGAAACACCAGGACTTCGTCCAGC GCATGGTGGCGAAGGGCTACACCGAGAAGCAGGTGCGCCTGCTCGCCGAGTGGTACCTACGGGCGAGGAAAACCTCCTGA
Upstream 100 bases:
>100_bases ATCGTCCTCAACCCGGTCGAATCGTTGCCGCTATTGGGTATGGCACGATCGTTGCGAGTTTCGAGTCAGCGCATCATCGA TCAACGAGCAGGAGTACGTC
Downstream 100 bases:
>100_bases CGGGGATGCCACCATGAGTCAACTCGTCGACCGCCGGCTTTCGGGCAAGAACCGCAGCGCTGTCAACCGCCAGCGCTTCC TGCGCCGTTTCAAGGCGCAG
Product: putative Serine protein kinase, PrkA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MSLFNQYIERYRREEEEYSLEEFLAICKKDPLAYASSAERLLAAIGEPELVDTRQDPRLSRLFSNKVIKRYPAFKDFFGM EETIEQIVSYFRHAAQGLEEKKQILYLLGPVGGGKSSLAEKLKHLMEKAPFYAIKGSPVNDSPLSLFSADEDGDILEQEY GIPRRYLGRVLSPWAVKRLHEYNGDITKFRVVKRWPSVLGQVAISKTEPGDENNQDISSLVGKVDIRKLEKYSQDDPDAY SYSGGLCLANQGLMEFVEMFKAPIKVLHPLLTATQEGNYKGTEGFGAIPFDGVVLAHSNESEWTAFRNNKNNEAFLDRIY IVKVPYCLRVSEEVKIYRKLLQHSSLSESPCAPGTLEMLAQFAVLTRLKEPENSSIYSKMRVYDGENLKDTDPKAKSYQE YRDFAGVDEGMTGVSTRFAFKILSRVFNFDHSEIAANPVHLLYVLEQQIEQEQLPPESEQRYVAYLKEYLAPHYAEYIEK ELQTAYLESYSEYGQNIFDRYVTYADMWIQDQEFRDPDTGEILDRGQLNTELEKIEKPAGIANPKDFRHEVVNFVLRARA QNHGKNPAWTSYEKLRAVIEKRMFSSTEDLLPVISFNAKASSEEQKKHQDFVQRMVAKGYTEKQVRLLAEWYLRARKTS
Sequences:
>Translated_639_residues MSLFNQYIERYRREEEEYSLEEFLAICKKDPLAYASSAERLLAAIGEPELVDTRQDPRLSRLFSNKVIKRYPAFKDFFGM EETIEQIVSYFRHAAQGLEEKKQILYLLGPVGGGKSSLAEKLKHLMEKAPFYAIKGSPVNDSPLSLFSADEDGDILEQEY GIPRRYLGRVLSPWAVKRLHEYNGDITKFRVVKRWPSVLGQVAISKTEPGDENNQDISSLVGKVDIRKLEKYSQDDPDAY SYSGGLCLANQGLMEFVEMFKAPIKVLHPLLTATQEGNYKGTEGFGAIPFDGVVLAHSNESEWTAFRNNKNNEAFLDRIY IVKVPYCLRVSEEVKIYRKLLQHSSLSESPCAPGTLEMLAQFAVLTRLKEPENSSIYSKMRVYDGENLKDTDPKAKSYQE YRDFAGVDEGMTGVSTRFAFKILSRVFNFDHSEIAANPVHLLYVLEQQIEQEQLPPESEQRYVAYLKEYLAPHYAEYIEK ELQTAYLESYSEYGQNIFDRYVTYADMWIQDQEFRDPDTGEILDRGQLNTELEKIEKPAGIANPKDFRHEVVNFVLRARA QNHGKNPAWTSYEKLRAVIEKRMFSSTEDLLPVISFNAKASSEEQKKHQDFVQRMVAKGYTEKQVRLLAEWYLRARKTS >Mature_638_residues SLFNQYIERYRREEEEYSLEEFLAICKKDPLAYASSAERLLAAIGEPELVDTRQDPRLSRLFSNKVIKRYPAFKDFFGME ETIEQIVSYFRHAAQGLEEKKQILYLLGPVGGGKSSLAEKLKHLMEKAPFYAIKGSPVNDSPLSLFSADEDGDILEQEYG IPRRYLGRVLSPWAVKRLHEYNGDITKFRVVKRWPSVLGQVAISKTEPGDENNQDISSLVGKVDIRKLEKYSQDDPDAYS YSGGLCLANQGLMEFVEMFKAPIKVLHPLLTATQEGNYKGTEGFGAIPFDGVVLAHSNESEWTAFRNNKNNEAFLDRIYI VKVPYCLRVSEEVKIYRKLLQHSSLSESPCAPGTLEMLAQFAVLTRLKEPENSSIYSKMRVYDGENLKDTDPKAKSYQEY RDFAGVDEGMTGVSTRFAFKILSRVFNFDHSEIAANPVHLLYVLEQQIEQEQLPPESEQRYVAYLKEYLAPHYAEYIEKE LQTAYLESYSEYGQNIFDRYVTYADMWIQDQEFRDPDTGEILDRGQLNTELEKIEKPAGIANPKDFRHEVVNFVLRARAQ NHGKNPAWTSYEKLRAVIEKRMFSSTEDLLPVISFNAKASSEEQKKHQDFVQRMVAKGYTEKQVRLLAEWYLRARKTS
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prkA family [H]
Homologues:
Organism=Escherichia coli, GI1788083, Length=644, Percent_Identity=76.0869565217391, Blast_Score=1054, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013153 - InterPro: IPR010650 - InterPro: IPR016230 [H]
Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]
EC number: NA
Molecular weight: Translated: 73554; Mature: 73423
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFNQYIERYRREEEEYSLEEFLAICKKDPLAYASSAERLLAAIGEPELVDTRQDPRLS CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH RLFSNKVIKRYPAFKDFFGMEETIEQIVSYFRHAAQGLEEKKQILYLLGPVGGGKSSLAE HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHEEEEECCCCCCHHHHHH KLKHLMEKAPFYAIKGSPVNDSPLSLFSADEDGDILEQEYGIPRRYLGRVLSPWAVKRLH HHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHHHHHHCHHHHHHHH EYNGDITKFRVVKRWPSVLGQVAISKTEPGDENNQDISSLVGKVDIRKLEKYSQDDPDAY HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC SYSGGLCLANQGLMEFVEMFKAPIKVLHPLLTATQEGNYKGTEGFGAIPFDGVVLAHSNE CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC SEWTAFRNNKNNEAFLDRIYIVKVPYCLRVSEEVKIYRKLLQHSSLSESPCAPGTLEMLA CCHHHHCCCCCCHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH QFAVLTRLKEPENSSIYSKMRVYDGENLKDTDPKAKSYQEYRDFAGVDEGMTGVSTRFAF HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH KILSRVFNFDHSEIAANPVHLLYVLEQQIEQEQLPPESEQRYVAYLKEYLAPHYAEYIEK HHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ELQTAYLESYSEYGQNIFDRYVTYADMWIQDQEFRDPDTGEILDRGQLNTELEKIEKPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCC IANPKDFRHEVVNFVLRARAQNHGKNPAWTSYEKLRAVIEKRMFSSTEDLLPVISFNAKA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCC SSEEQKKHQDFVQRMVAKGYTEKQVRLLAEWYLRARKTS CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLFNQYIERYRREEEEYSLEEFLAICKKDPLAYASSAERLLAAIGEPELVDTRQDPRLS CHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH RLFSNKVIKRYPAFKDFFGMEETIEQIVSYFRHAAQGLEEKKQILYLLGPVGGGKSSLAE HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHEEEEECCCCCCHHHHHH KLKHLMEKAPFYAIKGSPVNDSPLSLFSADEDGDILEQEYGIPRRYLGRVLSPWAVKRLH HHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHHHHHHCHHHHHHHH EYNGDITKFRVVKRWPSVLGQVAISKTEPGDENNQDISSLVGKVDIRKLEKYSQDDPDAY HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC SYSGGLCLANQGLMEFVEMFKAPIKVLHPLLTATQEGNYKGTEGFGAIPFDGVVLAHSNE CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC SEWTAFRNNKNNEAFLDRIYIVKVPYCLRVSEEVKIYRKLLQHSSLSESPCAPGTLEMLA CCHHHHCCCCCCHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH QFAVLTRLKEPENSSIYSKMRVYDGENLKDTDPKAKSYQEYRDFAGVDEGMTGVSTRFAF HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH KILSRVFNFDHSEIAANPVHLLYVLEQQIEQEQLPPESEQRYVAYLKEYLAPHYAEYIEK HHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ELQTAYLESYSEYGQNIFDRYVTYADMWIQDQEFRDPDTGEILDRGQLNTELEKIEKPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCC IANPKDFRHEVVNFVLRARAQNHGKNPAWTSYEKLRAVIEKRMFSSTEDLLPVISFNAKA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCC SSEEQKKHQDFVQRMVAKGYTEKQVRLLAEWYLRARKTS CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]