Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317249

Identifier: 74317249

GI number: 74317249

Start: 1290345

End: 1290818

Strand: Reverse

Name: 74317249

Synonym: Tbd_1231

Alternate gene names: NA

Gene position: 1290818-1290345 (Counterclockwise)

Preceding gene: 74317253

Following gene: 74317248

Centisome position: 44.36

GC content: 63.5

Gene sequence:

>474_bases
TTGAGGACGATTGGTGCCGCGACCTGTCGAGGCGACCGAGGCTCGCGCCGCGTCATGGTTCGAGCCGGCTACGCGGGTTC
GCCCCAAACGGTCGTAAAGGGTTGTAGCTTCTACAACGAGGGCGGCGCGGACGTGCGCGATCGCGCGAAACGCGCTGTGC
GGCTTGGGGAAGGGAAAATCGCTGGCGCCTGCGCGCCGCAGATCAGGTTCAGAAAAGCGGGCGTGCCGAACTACCATCCG
AGCCCGCTTCGCCGGTGCGTTCCCCGGCTCGACGCTCGCCGAGGGGGCCCGGCCTCGCTGCGAAGTCCTCGCTCCGACCC
GTGGCAACGGGGCGTCCGGACGAAGTACAGCAGCGCAACACTTTTATCCATCGGCATCTTCAAGAATCTCTCACATCGCT
CCCTGCTTTATAGGATGTTCTGCGATTCAGTCGCCATTAGACACCCGATCTTTGCCGCGTGGAACAGGCGATAA

Upstream 100 bases:

>100_bases
AACAAGCTCATGACGTACTCCTGCTCGTTGATCGATGATGCGCTGACTCGAAACTCGCAACGATCGTGCCATACCCAATA
GCGGCAACGATTCGACCGGG

Downstream 100 bases:

>100_bases
AAACAATTGATCGCTGAGGCGCGACGCGCGCAAGGTCCGCGGAAAGGTCTCGCCGTCTAGCGACCGAGGCTCAGCGCACG
AAGTTCAACGGCACCTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKIAGACAPQIRFRKAGVPNYHP
SPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSATLLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR

Sequences:

>Translated_157_residues
MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKIAGACAPQIRFRKAGVPNYHP
SPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSATLLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR
>Mature_157_residues
MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKIAGACAPQIRFRKAGVPNYHP
SPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSATLLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17414; Mature: 17414

Theoretical pI: Translated: 12.09; Mature: 12.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKI
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
AGACAPQIRFRKAGVPNYHPSPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSAT
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCH
LLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure
MRTIGAATCRGDRGSRRVMVRAGYAGSPQTVVKGCSFYNEGGADVRDRAKRAVRLGEGKI
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
AGACAPQIRFRKAGVPNYHPSPLRRCVPRLDARRGGPASLRSPRSDPWQRGVRTKYSSAT
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCH
LLSIGIFKNLSHRSLLYRMFCDSVAIRHPIFAAWNRR
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA