Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317229

Identifier: 74317229

GI number: 74317229

Start: 1267169

End: 1267675

Strand: Reverse

Name: 74317229

Synonym: Tbd_1211

Alternate gene names: NA

Gene position: 1267675-1267169 (Counterclockwise)

Preceding gene: 74317230

Following gene: 74317228

Centisome position: 43.57

GC content: 52.66

Gene sequence:

>507_bases
ATGCCCACCAAACCACTAGACCGTCTGATGTTTGTCCAAGGAGGCGTATGCTTTTTTTGCAAACAACCTTTGCCCAAGGC
AGAGGCAAGTGTTGAGCATTTACTTGCCAGCGCCAATGGCGGAGGCAACAGCGATGAAAACTGCGTCGCTTGCTGCAAGG
CGGTTAATGCGCTGCTCGGCAGTATGTCGCTCAAAGAAAAATTTCAGGTCGTGCTAAATCAGAAAGGGCAGTTCAAATGC
CCCAACGGAGCTGGCTCTGCCAAAGCAGCCGCAAAGCCAAAAGCACCAGCCATCGCAAAGCCAAAGGATGACAAGCTCGC
GCTGGTTATTGCCAATCTGAAGCAGCGCGGCAACTCCAAACCCCGCACACTCAAAACCCTCACGAGTTCTGTCTCATCCC
TCTTTCCAAAGGGCATTTCTGAGGCTGATCTCGCCGCATTGGTTCAGCAGTTGCAATCAACGGGCAAGGTCACCGTGGAA
GGGAGCAAGGTTACTTATGCGCTCTGA

Upstream 100 bases:

>100_bases
TTGTTCGTTCCCATTTCTCACCTTTCCGCCGTGCCTAACACGGCGTTCTAGCGGGACTGTCCGCAAGCGGCCAGCCCCTA
AACTTTGTCGTTAGAAGCCT

Downstream 100 bases:

>100_bases
ATTAACGGCTTCTAACCCTACATTCGAGCGGGACTGCGCAAAAGCGCGCAGCCCCTCAATTCCACGTTAGCCCTCTCAAA
GGAGAAGCCTCATGAGCAAG

Product: HNH nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPTKPLDRLMFVQGGVCFFCKQPLPKAEASVEHLLASANGGGNSDENCVACCKAVNALLGSMSLKEKFQVVLNQKGQFKC
PNGAGSAKAAAKPKAPAIAKPKDDKLALVIANLKQRGNSKPRTLKTLTSSVSSLFPKGISEADLAALVQQLQSTGKVTVE
GSKVTYAL

Sequences:

>Translated_168_residues
MPTKPLDRLMFVQGGVCFFCKQPLPKAEASVEHLLASANGGGNSDENCVACCKAVNALLGSMSLKEKFQVVLNQKGQFKC
PNGAGSAKAAAKPKAPAIAKPKDDKLALVIANLKQRGNSKPRTLKTLTSSVSSLFPKGISEADLAALVQQLQSTGKVTVE
GSKVTYAL
>Mature_167_residues
PTKPLDRLMFVQGGVCFFCKQPLPKAEASVEHLLASANGGGNSDENCVACCKAVNALLGSMSLKEKFQVVLNQKGQFKCP
NGAGSAKAAAKPKAPAIAKPKDDKLALVIANLKQRGNSKPRTLKTLTSSVSSLFPKGISEADLAALVQQLQSTGKVTVEG
SKVTYAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17573; Mature: 17441

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTKPLDRLMFVQGGVCFFCKQPLPKAEASVEHLLASANGGGNSDENCVACCKAVNALLG
CCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SMSLKEKFQVVLNQKGQFKCPNGAGSAKAAAKPKAPAIAKPKDDKLALVIANLKQRGNSK
CHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHEEHHHHCCCCC
PRTLKTLTSSVSSLFPKGISEADLAALVQQLQSTGKVTVEGSKVTYAL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEC
>Mature Secondary Structure 
PTKPLDRLMFVQGGVCFFCKQPLPKAEASVEHLLASANGGGNSDENCVACCKAVNALLG
CCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SMSLKEKFQVVLNQKGQFKCPNGAGSAKAAAKPKAPAIAKPKDDKLALVIANLKQRGNSK
CHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHEEHHHHCCCCC
PRTLKTLTSSVSSLFPKGISEADLAALVQQLQSTGKVTVEGSKVTYAL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA