| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ygfY [C]
Identifier: 74317204
GI number: 74317204
Start: 1245616
End: 1245930
Strand: Direct
Name: ygfY [C]
Synonym: Tbd_1186
Alternate gene names: 74317204
Gene position: 1245616-1245930 (Clockwise)
Preceding gene: 74317203
Following gene: 74317205
Centisome position: 42.81
GC content: 64.76
Gene sequence:
>315_bases GTGTCTGAGTCACGGCCGGCGGTGGATGATGCCGAAGGCGCAGGGGGAAATTTTCCCGACGACGCGGGCAACCTGCAAAG CGCCCGGATCGCCTGGCGCTGCCGTCGCGGCCTGCTCGAGCTGGATCTCTGGCTGGGTGGCTTTTGGGCCGCGCAGCGCG CTACACTTCGGTCTCGTGAGACCGCCGCGTTCGTGCGCCTCCTGGCCTTGTCGGACATGGAAATCCTCGACAGGCTGCAC GGCCGCTCGGCGCCGGACGATGCCGACGTCGACGCGCTCATTCAACGCCTGAAAAATTTTCGAGAAGCAAAATGA
Upstream 100 bases:
>100_bases TATCGTTGCCGCGGCATCATGAACTGTGTCGACGTCTGCCCCAAGGGCCTCAACCCTGCGGGGGCGATCGCGCGGATCCG CACGCTGCTGGCCAAACGCC
Downstream 100 bases:
>100_bases AGAAAACCGTCACCCTCACTTTCAGCGACGGCAGTCCCGCGATTGAATTGCCGATCGAAGAGGGCACCTACGGCAAGCCC GTGATCGACATCCGCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRETAAFVRLLALSDMEILDRLH GRSAPDDADVDALIQRLKNFREAK
Sequences:
>Translated_104_residues MSESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRETAAFVRLLALSDMEILDRLH GRSAPDDADVDALIQRLKNFREAK >Mature_103_residues SESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRETAAFVRLLALSDMEILDRLHG RSAPDDADVDALIQRLKNFREAK
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11553; Mature: 11422
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAFVRLLALSDMEILDRLHGRSAPDDADVDALIQRLKNFREAK HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SESRPAVDDAEGAGGNFPDDAGNLQSARIAWRCRRGLLELDLWLGGFWAAQRATLRSRE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAFVRLLALSDMEILDRLHGRSAPDDADVDALIQRLKNFREAK HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA