Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317035

Identifier: 74317035

GI number: 74317035

Start: 1085026

End: 1085718

Strand: Reverse

Name: 74317035

Synonym: Tbd_1017

Alternate gene names: NA

Gene position: 1085718-1085026 (Counterclockwise)

Preceding gene: 74317036

Following gene: 74317034

Centisome position: 37.31

GC content: 66.81

Gene sequence:

>693_bases
ATGACCGCAGATGCCTATGCCTACTGCGCGACCCTCACGCGCGACCAGTGGGCTTGGGAATTCCTGCGCCGCAATCCGGA
CTACCAGCGTGATTACCGCGCCTTCATCGCAATCTGGCGCGCACTCGAAGCGGACTACGGCGCGCCTCCCGATCGCGATT
TTTCGAAGTGGAAGCGCGACCCCCGCGCCTATGGCCCGCTTCCCGGCGAGGCCGAAGTCGCAACACCCAAGAGCGAACTG
TGCACGGTCGACGACGAGCGCGTGCTGCTCGAATGCTGGATGGGTGCCAAGTGGGGCTTCTACAAATTCCCGCTCGACCC
CGCGTGCATCGCGCCCGCGCCCGACGAACTGTCGTGGCGCCCGCCGCCGCAGCAGGAGCGGGAGATCGAAGCACCCTACC
GCCTCGACGTCGCGTTCGATCTTTCCCTGCCGTTGCCGCCACAGCTCGAAGCCGCGAAGTTCCGCCTCGTCAGTCGCGCC
GCCGACTTGCGGCGTCAGGGCTACGCGGCGCCGAAGACGGTGGCGAATCAGCGCGCCCACTGGACCACGATGCTGCGCCT
GCTTGACGGCGCCGCCGCGGCAGACGCGGATGCCACGGGACTGCTGGATGAAGCACGGACGCTGGCTGCGGGTGGCTATC
GCGAGATCCCGAGGCTGACACAGGATGCGCACCGGCCAATCAATGATGGATAA

Upstream 100 bases:

>100_bases
TGCAGGACACGTTGGCGAAAATCGTCGAAGACAAGAACAACCGCGCGATCCGCTTCGGCGTCGTCAACGTCGCCAGCATG
ATCCTGCTGCCGATCTGAAC

Downstream 100 bases:

>100_bases
GGCCACGCCGATCGAAATTACCCAGGCCGTCGGGTTTTTCATAACGTAATATCGAAACCCCCAATCAGTAGATCTTAGGG
ATCAAAAGCTCCGTGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRDPRAYGPLPGEAEVATPKSEL
CTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWRPPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRA
ADLRRQGYAAPKTVANQRAHWTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG

Sequences:

>Translated_230_residues
MTADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRDPRAYGPLPGEAEVATPKSEL
CTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWRPPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRA
ADLRRQGYAAPKTVANQRAHWTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG
>Mature_229_residues
TADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRDPRAYGPLPGEAEVATPKSELC
TVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWRPPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRAA
DLRRQGYAAPKTVANQRAHWTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26052; Mature: 25921

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRD
CCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC
PRAYGPLPGEAEVATPKSELCTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWR
CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCC
PPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRAADLRRQGYAAPKTVANQRAH
CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
WTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TADAYAYCATLTRDQWAWEFLRRNPDYQRDYRAFIAIWRALEADYGAPPDRDFSKWKRD
CCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCC
PRAYGPLPGEAEVATPKSELCTVDDERVLLECWMGAKWGFYKFPLDPACIAPAPDELSWR
CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCC
PPPQQEREIEAPYRLDVAFDLSLPLPPQLEAAKFRLVSRAADLRRQGYAAPKTVANQRAH
CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
WTTMLRLLDGAAAADADATGLLDEARTLAAGGYREIPRLTQDAHRPINDG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA