Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317032

Identifier: 74317032

GI number: 74317032

Start: 1082945

End: 1083310

Strand: Direct

Name: 74317032

Synonym: Tbd_1014

Alternate gene names: NA

Gene position: 1082945-1083310 (Clockwise)

Preceding gene: 74317031

Following gene: 74317033

Centisome position: 37.22

GC content: 62.02

Gene sequence:

>366_bases
TTGGAACGCCCAGCCAAGAGTGAACTCCCGCCGATTCCGGCGAAACGCTATTTCACGATCGGTGAAGTCTCCGAGCTGTG
CGCCGTCAAGGCGCACGTGCTGCGTTACTGGGAGCAGGAATTCTCCCAGTTGCGGCCGGTCAAGCGGAGGGGCAATCGGC
GCTACTACCAGCACCACGAAGTCCTGCTGATCCGGCGCATCCGCGAACTCCTCTACGAAGAAGGTTTCACGATCAGCGGT
GCGCGCCAACGCCTCGAACATGACGCCGATTCGGCGCCGAGCCCTGCGCCGGCAGGCGCGACGACCGGCCTCGATGTCGG
CGAACTGCGCAGCGAACTCGCCGCGATTCTGAAAATATTAGGTTAA

Upstream 100 bases:

>100_bases
CGCAATCCGAAGACCGGCGAGGAAATGCCGATCTCGGCTCGCCGCGTGGTGACCTTCCACGCCAGTCAGAAACTCAAGTC
GCAGGTCGAAGGCGCCCGAA

Downstream 100 bases:

>100_bases
CAGGCTTACGCCGGACGCGACTCCTCTGCTAGAATCTCGGGCTTCGTCGGGGCGTAGCGCAGCCTGGTAGCGCACCTGCA
TGGGGTGCAGGGGGTCGGAA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; MerR Family Regulatory Family; Transcriptional Regulator Protein; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEEGFTISG
ARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKILG

Sequences:

>Translated_121_residues
MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEEGFTISG
ARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKILG
>Mature_121_residues
MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHEVLLIRRIRELLYEEGFTISG
ARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKILG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13794; Mature: 13794

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHE
CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VLLIRRIRELLYEEGFTISGARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKIL
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
G
C
>Mature Secondary Structure
MERPAKSELPPIPAKRYFTIGEVSELCAVKAHVLRYWEQEFSQLRPVKRRGNRRYYQHHE
CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VLLIRRIRELLYEEGFTISGARQRLEHDADSAPSPAPAGATTGLDVGELRSELAAILKIL
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA