| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317009
Identifier: 74317009
GI number: 74317009
Start: 1057374
End: 1058030
Strand: Reverse
Name: 74317009
Synonym: Tbd_0991
Alternate gene names: NA
Gene position: 1058030-1057374 (Counterclockwise)
Preceding gene: 74317010
Following gene: 74317008
Centisome position: 36.36
GC content: 68.8
Gene sequence:
>657_bases ATGATCCGCGCTAAGCCCCGCCTCGGCCGCCGCGTACTCGCGGCGCTGGCACTGGTCGCAGCGGTACCGACCGCGGCCAG CGACGACTTCGACATGCGTAGCGCGGACGCCGTCAACGAAGGCGCGCTGCGTTTCCTCGAGGCGCCGCCTGCGAACGCCG TGCATCATCACGAGAACCGCGTCCGCGTCACCGCCGAGAGCCTGCGCTCGGGCTGGGTCGAACTCGAGCAATGCCACAGC CACATGGACGCGGTGCCGCGCAGCCAGATCACGTTTCGCGAGGGCTACGTGCGCGGGCTCGCGATCGACACCTTTTCCGG CATCGGCCGGGCGTGGGTCGAAGGCGCGAGCGTGCAGCTCGAGAACGTCGCACCGGGCGCGCGGCTGTGTCTTTCGGCCC GGACGCGTGCGCTGCGCAACACCGGCAACGGCTACTACAGCCTCTCGCACGGCCCCTACATGCGCAAGTTCCTCGACGGC TATTACCCGATGCACGTGACACTCGACGTCACCTACCCCGCGGCGCAACTGCGGCTGCTCGACGTCAGCCCGGAGCGGCA GCCCGGCTTCGCACACGACGAAGCGCCCGGCCGGGTGAAGCTCGACACGCATTTCGAAGGGGAACTGCGCCTTGTGTTCC AGTTCGAGCACCGCTGA
Upstream 100 bases:
>100_bases GGCGCGGTCATGGTCTCCCGTATCGGCGACCCGTACTGGCGTGAACGCTACGACGGCGCGCGCCGCGTCGTCGTGCCGGA CGCCGGGCAACCGGCCGCAG
Downstream 100 bases:
>100_bases ACGGCATATTATTGATAACCGTTCTCATTAGTAGTAGGATGCCGCACAATCCCTTTCACCCCAAGGAAACGAAGATGAAA TCGACGCTCACCCGGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIRAKPRLGRRVLAALALVAAVPTAASDDFDMRSADAVNEGALRFLEAPPANAVHHHENRVRVTAESLRSGWVELEQCHS HMDAVPRSQITFREGYVRGLAIDTFSGIGRAWVEGASVQLENVAPGARLCLSARTRALRNTGNGYYSLSHGPYMRKFLDG YYPMHVTLDVTYPAAQLRLLDVSPERQPGFAHDEAPGRVKLDTHFEGELRLVFQFEHR
Sequences:
>Translated_218_residues MIRAKPRLGRRVLAALALVAAVPTAASDDFDMRSADAVNEGALRFLEAPPANAVHHHENRVRVTAESLRSGWVELEQCHS HMDAVPRSQITFREGYVRGLAIDTFSGIGRAWVEGASVQLENVAPGARLCLSARTRALRNTGNGYYSLSHGPYMRKFLDG YYPMHVTLDVTYPAAQLRLLDVSPERQPGFAHDEAPGRVKLDTHFEGELRLVFQFEHR >Mature_218_residues MIRAKPRLGRRVLAALALVAAVPTAASDDFDMRSADAVNEGALRFLEAPPANAVHHHENRVRVTAESLRSGWVELEQCHS HMDAVPRSQITFREGYVRGLAIDTFSGIGRAWVEGASVQLENVAPGARLCLSARTRALRNTGNGYYSLSHGPYMRKFLDG YYPMHVTLDVTYPAAQLRLLDVSPERQPGFAHDEAPGRVKLDTHFEGELRLVFQFEHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24274; Mature: 24274
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRAKPRLGRRVLAALALVAAVPTAASDDFDMRSADAVNEGALRFLEAPPANAVHHHENR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCE VRVTAESLRSGWVELEQCHSHMDAVPRSQITFREGYVRGLAIDTFSGIGRAWVEGASVQL EEEEHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECHHCCCHHHHCCCCEEE ENVAPGARLCLSARTRALRNTGNGYYSLSHGPYMRKFLDGYYPMHVTLDVTYPAAQLRLL ECCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEEEEE DVSPERQPGFAHDEAPGRVKLDTHFEGELRLVFQFEHR ECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MIRAKPRLGRRVLAALALVAAVPTAASDDFDMRSADAVNEGALRFLEAPPANAVHHHENR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCE VRVTAESLRSGWVELEQCHSHMDAVPRSQITFREGYVRGLAIDTFSGIGRAWVEGASVQL EEEEHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECHHCCCHHHHCCCCEEE ENVAPGARLCLSARTRALRNTGNGYYSLSHGPYMRKFLDGYYPMHVTLDVTYPAAQLRLL ECCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCCEEEEEEEECCCEEEEEE DVSPERQPGFAHDEAPGRVKLDTHFEGELRLVFQFEHR ECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA