Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316915

Identifier: 74316915

GI number: 74316915

Start: 946980

End: 947495

Strand: Direct

Name: 74316915

Synonym: Tbd_0897

Alternate gene names: NA

Gene position: 946980-947495 (Clockwise)

Preceding gene: 74316914

Following gene: 74316916

Centisome position: 32.54

GC content: 61.43

Gene sequence:

>516_bases
ATGGAACGAGCCCCCTTGACTGCCCGCACCACCCTTTGTGCCTCGAGCCTCATCACGGCCGCAATGTCTGCTTTCGCGTA
CCCCGAAGCCCTCGCTTGCGTTGACGGCGATGGCACCGCCTACTGGAACCGTGGCTGGAAACTCGCAAATTACGGGGTAT
CCGGTTCGTTCAGCCTCGAGACCGTGCTCTCGGAATGGGATCCCACGCGTAGCCATTTCTATCTCCGAGAGCACGCGGTG
GCCAGCGATGCGCCAAGCTATGCCGGCGTCATCTTGCCGAGCTTCTTCGCGAAGCGGGACGACGCACTCAGTTATTCGGA
CGCCCTGCTTCGAGTTCGGCTTCTACCTCGATCTGGCGATGACTTCGTCGTGCTCGGGTTTGTCCATGGGCTTATTGACG
TCGGCCAGCGGCACGCTCAAAGACGGAGTACCTTCCGTAGACGGGCTCGCTGCGGGCATGTGGTTGTGGCCGACCGCCTT
TATCCAATTGCCCGTCGGCGTCGAGCCGGATCCTGA

Upstream 100 bases:

>100_bases
CGGTGGCGCGAATCCTGCTTTTTCCTCCCCAGCACAATAATGTCGAAGGGATCCGCCTTCGGCAGCATGCGGAGCGTCCA
TTGACTGCAATCCACGACAG

Downstream 100 bases:

>100_bases
TGCGCTAGTCAACTACGATGCTGTAGCCGGCCGGTTCGGTTATCACCTGGTTGCCGTGGAAGAGGTCGCCTCCGTGCAGG
AATCTTCGATGGTGTTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MERAPLTARTTLCASSLITAAMSAFAYPEALACVDGDGTAYWNRGWKLANYGVSGSFSLETVLSEWDPTRSHFYLREHAV
ASDAPSYAGVILPSFFAKRDDALSYSDALLRVRLLPRSGDDFVVLGFVHGLIDVGQRHAQRRSTFRRRARCGHVVVADRL
YPIARRRRAGS

Sequences:

>Translated_171_residues
MERAPLTARTTLCASSLITAAMSAFAYPEALACVDGDGTAYWNRGWKLANYGVSGSFSLETVLSEWDPTRSHFYLREHAV
ASDAPSYAGVILPSFFAKRDDALSYSDALLRVRLLPRSGDDFVVLGFVHGLIDVGQRHAQRRSTFRRRARCGHVVVADRL
YPIARRRRAGS
>Mature_171_residues
MERAPLTARTTLCASSLITAAMSAFAYPEALACVDGDGTAYWNRGWKLANYGVSGSFSLETVLSEWDPTRSHFYLREHAV
ASDAPSYAGVILPSFFAKRDDALSYSDALLRVRLLPRSGDDFVVLGFVHGLIDVGQRHAQRRSTFRRRARCGHVVVADRL
YPIARRRRAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18953; Mature: 18953

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERAPLTARTTLCASSLITAAMSAFAYPEALACVDGDGTAYWNRGWKLANYGVSGSFSLE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCEEEEECCCCCCCHHH
TVLSEWDPTRSHFYLREHAVASDAPSYAGVILPSFFAKRDDALSYSDALLRVRLLPRSGD
HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCC
DFVVLGFVHGLIDVGQRHAQRRSTFRRRARCGHVVVADRLYPIARRRRAGS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERAPLTARTTLCASSLITAAMSAFAYPEALACVDGDGTAYWNRGWKLANYGVSGSFSLE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCEEEEECCCCCCCHHH
TVLSEWDPTRSHFYLREHAVASDAPSYAGVILPSFFAKRDDALSYSDALLRVRLLPRSGD
HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCC
DFVVLGFVHGLIDVGQRHAQRRSTFRRRARCGHVVVADRLYPIARRRRAGS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA