Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316916

Identifier: 74316916

GI number: 74316916

Start: 947784

End: 948695

Strand: Direct

Name: 74316916

Synonym: Tbd_0898

Alternate gene names: NA

Gene position: 947784-948695 (Clockwise)

Preceding gene: 74316915

Following gene: 74316918

Centisome position: 32.57

GC content: 52.96

Gene sequence:

>912_bases
TTGTGGGAAAATTTTTTGTTCAGTGTTGACCGTAAGGAGACGACGATGAGCATGCGTTTACTGGCAAGGAAAATGCTGTT
TATGCGGGGTGCCTCGTGGCAGCACCCTGTCATCCGGCTCGGACTGACCGCACTTGATCCTGTCGACGCCATCATTCGCA
GCGCGACGGGGTTACGCAGTCTTCCTCGGTACTCGACCCGGGTCAGATCCAACGGTTTATCGAACCAGTTCGGTGGGGGC
AAATTTGCCCGTCAGGGGAGAGTCATTCTCCACATGCTTCAACGGCACTGCGCCTTGTCTCCTAAGAGCCGGGTTCTGGA
AATCGGTTGCGGATGTGGACGTACGGCAGTGCAGTTGGCGAGCTTTTTGGAAGCTGAAAAATACGTGGGCATGGATATAG
AGATGGTTTCACTTGAGGCATGTCGTGATAACCCTCATTTGAAAAGGCGGGGTTTCAAATTCGATTTGATCGACATCCAG
AATAATGAATACAACCCGAAGGGCCGGTTCCGCGCGGACGAATACCGTTTTTCTTACCTCGATGGAAGCATGGACTGTGT
TTTTCTCATCTCGGTATTCACGCACATGCTTCCGGAAGACGTGTCCAATTATGTAACCGAGATCGGTCGCATGCTTGATC
GAGGCGGGATGTGCCTATTCTCAACGTTCCTCATCGACCATGGGCGAGGTGGGCGCGGGCTCAACTTTGCCCATGACGGA
AATGGCTTCAGCTACTACGACGTACGTATGCCAGAAATAGCGGTCGCATATCCACAGCGTTTTTTTGAGGATAGCTTCGG
CAGGGCCGGGCTCGTGCTTCACGAGGTCAAATTGGGCAGTTGGCGAGACGATGGTCGGGGCAGCTATCCGGAATTCGGCC
AGGATGTACTTGTGTTTAAGAAAGCCGCGTGA

Upstream 100 bases:

>100_bases
CGAGGGGCGGCGTGGAAGAGCGACCACTACGGTCCTGGGCTCTCTGCGCTTATGGAGCACTCACTCAGGCAGGGGGGCGC
AAGAGGCCGCCTGGCCTCCA

Downstream 100 bases:

>100_bases
CGGTACCGTTATAAGAAACTCTGGTCTCTGAACATCGACCGGCGGCTGTACGGTTTTCTGGCAGAGGCTGAAAGGAGAGT
TGAATGAAAACCGCCGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MWENFLFSVDRKETTMSMRLLARKMLFMRGASWQHPVIRLGLTALDPVDAIIRSATGLRSLPRYSTRVRSNGLSNQFGGG
KFARQGRVILHMLQRHCALSPKSRVLEIGCGCGRTAVQLASFLEAEKYVGMDIEMVSLEACRDNPHLKRRGFKFDLIDIQ
NNEYNPKGRFRADEYRFSYLDGSMDCVFLISVFTHMLPEDVSNYVTEIGRMLDRGGMCLFSTFLIDHGRGGRGLNFAHDG
NGFSYYDVRMPEIAVAYPQRFFEDSFGRAGLVLHEVKLGSWRDDGRGSYPEFGQDVLVFKKAA

Sequences:

>Translated_303_residues
MWENFLFSVDRKETTMSMRLLARKMLFMRGASWQHPVIRLGLTALDPVDAIIRSATGLRSLPRYSTRVRSNGLSNQFGGG
KFARQGRVILHMLQRHCALSPKSRVLEIGCGCGRTAVQLASFLEAEKYVGMDIEMVSLEACRDNPHLKRRGFKFDLIDIQ
NNEYNPKGRFRADEYRFSYLDGSMDCVFLISVFTHMLPEDVSNYVTEIGRMLDRGGMCLFSTFLIDHGRGGRGLNFAHDG
NGFSYYDVRMPEIAVAYPQRFFEDSFGRAGLVLHEVKLGSWRDDGRGSYPEFGQDVLVFKKAA
>Mature_303_residues
MWENFLFSVDRKETTMSMRLLARKMLFMRGASWQHPVIRLGLTALDPVDAIIRSATGLRSLPRYSTRVRSNGLSNQFGGG
KFARQGRVILHMLQRHCALSPKSRVLEIGCGCGRTAVQLASFLEAEKYVGMDIEMVSLEACRDNPHLKRRGFKFDLIDIQ
NNEYNPKGRFRADEYRFSYLDGSMDCVFLISVFTHMLPEDVSNYVTEIGRMLDRGGMCLFSTFLIDHGRGGRGLNFAHDG
NGFSYYDVRMPEIAVAYPQRFFEDSFGRAGLVLHEVKLGSWRDDGRGSYPEFGQDVLVFKKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti expE3 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 34443; Mature: 34443

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWENFLFSVDRKETTMSMRLLARKMLFMRGASWQHPVIRLGLTALDPVDAIIRSATGLRS
CCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHCCHHHHHHHHHHHHHH
LPRYSTRVRSNGLSNQFGGGKFARQGRVILHMLQRHCALSPKSRVLEIGCGCGRTAVQLA
CCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH
SFLEAEKYVGMDIEMVSLEACRDNPHLKRRGFKFDLIDIQNNEYNPKGRFRADEYRFSYL
HHHHHHHHCCCCEEEEEHHHHCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEEC
DGSMDCVFLISVFTHMLPEDVSNYVTEIGRMLDRGGMCLFSTFLIDHGRGGRGLNFAHDG
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEECC
NGFSYYDVRMPEIAVAYPQRFFEDSFGRAGLVLHEVKLGSWRDDGRGSYPEFGQDVLVFK
CCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
KAA
ECC
>Mature Secondary Structure
MWENFLFSVDRKETTMSMRLLARKMLFMRGASWQHPVIRLGLTALDPVDAIIRSATGLRS
CCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHCCHHHHHHHHHHHHHH
LPRYSTRVRSNGLSNQFGGGKFARQGRVILHMLQRHCALSPKSRVLEIGCGCGRTAVQLA
CCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH
SFLEAEKYVGMDIEMVSLEACRDNPHLKRRGFKFDLIDIQNNEYNPKGRFRADEYRFSYL
HHHHHHHHCCCCEEEEEHHHHCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEEC
DGSMDCVFLISVFTHMLPEDVSNYVTEIGRMLDRGGMCLFSTFLIDHGRGGRGLNFAHDG
CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEECC
NGFSYYDVRMPEIAVAYPQRFFEDSFGRAGLVLHEVKLGSWRDDGRGSYPEFGQDVLVFK
CCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
KAA
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]