Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316912

Identifier: 74316912

GI number: 74316912

Start: 944212

End: 944643

Strand: Reverse

Name: 74316912

Synonym: Tbd_0894

Alternate gene names: NA

Gene position: 944643-944212 (Counterclockwise)

Preceding gene: 74316913

Following gene: 74316911

Centisome position: 32.46

GC content: 60.42

Gene sequence:

>432_bases
TTGAGCGCCTATATCGACACCAGTGCGCTGGCCAAGTGCTATATCCGTGAACCGCGCTCACTGGATGTACTCGACTGGGT
CGATGCACAGGATGAAGTCGCGACCAGCCCACTCACGCTAGTGGAATTCCGCTGCGTGCTGGCACGCCGTCGGCGCGCTC
AACAAATCGATCTGCAGCTTGAACGCGTTGCCCTCGCCGAATTTGACCGTGACGTGCAAGCGACCGCCTGGCGCATCCAG
CAGGATGCCTCCAGCCTGTTCGTCGAGGCGAGACAACTCATCGACCTGATTCCGGAACTGCCCCTGCGCGCATTGGACGC
GCTGCATCTGGCCTATGCCCGCCATTACGGTGCAGTCAGTTTCGCCACCGCCGACAAGCATCAAGCCGACGCGGCCAGAG
CGCTCGGTATCCCCGTTTTCACCTTTTATTGA

Upstream 100 bases:

>100_bases
CCAAGCGCCGGGTACGCTCGTTGCGGGCGTTTCTGGAAAGCCAGCCCATGCAAACGGTCCCCAGCGAGGACATTCTGGCG
GAAGAGCGAGAGGATCGCAT

Downstream 100 bases:

>100_bases
ATGGCATCATGACCGACCCCACCAACGCCCCCGCCCTCGACGAAAACCAGATCATCGCCGAGCGCCGCGCCAAGCTCGCC
GCGATCCGCGAGGCGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQLERVALAEFDRDVQATAWRIQ
QDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVSFATADKHQADAARALGIPVFTFY

Sequences:

>Translated_143_residues
MSAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQLERVALAEFDRDVQATAWRIQ
QDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVSFATADKHQADAARALGIPVFTFY
>Mature_142_residues
SAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQLERVALAEFDRDVQATAWRIQQ
DASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVSFATADKHQADAARALGIPVFTFY

Specific function: Unknown

COG id: COG1848

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16177; Mature: 16045

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQL
CCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ERVALAEFDRDVQATAWRIQQDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE
FATADKHQADAARALGIPVFTFY
ECCCCCHHHHHHHHHCCCEEECC
>Mature Secondary Structure 
SAYIDTSALAKCYIREPRSLDVLDWVDAQDEVATSPLTLVEFRCVLARRRRAQQIDLQL
CCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ERVALAEFDRDVQATAWRIQQDASSLFVEARQLIDLIPELPLRALDALHLAYARHYGAVS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE
FATADKHQADAARALGIPVFTFY
ECCCCCHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA