| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316901
Identifier: 74316901
GI number: 74316901
Start: 932988
End: 933854
Strand: Direct
Name: 74316901
Synonym: Tbd_0883
Alternate gene names: NA
Gene position: 932988-933854 (Clockwise)
Preceding gene: 74316900
Following gene: 74316902
Centisome position: 32.06
GC content: 70.13
Gene sequence:
>867_bases ATGACGTCGGGCTGGATGCTCGTCGCGGCGGCGCTGTTCGCGTTGATGGGCGTGCTGGTGAAGCACGCGTCGCAAAATTT CTCGGCGCCCGAGCTCGTGTTCTACCGCTCGGCCTTCGGCCTGCTCGCGATCTGGGCGATGATCGCGGTCGGCCAACGCC GGCTGCTCGCGCCCTTCGCGACAGTACACGCCGGAACGCACGTCTGGCGCGGGCTCTCCGGATTTCTCGCGCTGGTGCTG TTTTTTTACGCGTTGAGCCGGCTGCCGCTCGCCACGGCCGTCACCCTCAACTACACCGCGCCGCTGTTTCTCGCGGCCCT GTCGGCGTGGTGGCTGCGCGAACGCCACGGCCGCGGGGTGACCGGCGCGGTGCTGCTCGGCTTCGTCGGCGTCGTGTTGC TGCTGCGCCCGCAGATGGACAACCAGGCCTGGCAGCCCGCGCTCGCCGGGCTTGCCTCCGGCATGCTCGCCGCGGTCGCC TACGTCAACGTCAAACGCCTCGGCAAGCTCGGCGAGCCCGAGTGGCGCGTCGTGTTCTACTTCACGCTGCTGTCGACCGT GGGCGGGGCGCTATGGATGGCGCTCGCCGGATTTCATTTCCCGCACCCGAGCGATTGGCCGTGGCTTGTCGGCATCGGCG TCACGGCGACGCTTGCGCAACTCGCCCTGACCCGCGCCTACCACCGCGGGCACACGCTCACGGTCGGCGCGCTCGCCTAC AGCACCGTCGGCTTTTCCGCTCTCTACGGCGTGGTACTGTTCGGCGAGCGTCTGCCGCCGCTGACCTGGGCCGGCATGGC CGTCATCGCCGGCGCCGGCATCTGGGCCGTGCGCGCGTCGGCGCCGGCGCGACCCGAGTCGCTATAG
Upstream 100 bases:
>100_bases CATGCCTTCCTGCGGCGCGAGATCGAACCTCACCTCGGATGAGCGCACGCACGAACCCGGACGGGCGGCCGTTGCCGCCC GTTTTTTTCGTCCAGGCGAC
Downstream 100 bases:
>100_bases TGGAAAGACTGTTGAGGAGACCGTCATGATCAGCCTGGATGTGGACCAAAACCTGATTGCCGTCACCGTGATGGGCCAGT TCACGCTCGCCGACTATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFATVHAGTHVWRGLSGFLALVL FFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGVTGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVA YVNVKRLGKLGEPEWRVVFYFTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL
Sequences:
>Translated_288_residues MTSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFATVHAGTHVWRGLSGFLALVL FFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGVTGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVA YVNVKRLGKLGEPEWRVVFYFTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL >Mature_287_residues TSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFATVHAGTHVWRGLSGFLALVLF FYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGVTGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVAY VNVKRLGKLGEPEWRVVFYFTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAYS TVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324991, Length=243, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30912; Mature: 30781
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TVHAGTHVWRGLSGFLALVLFFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHHHHCCCCC TGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVAYVNVKRLGKLGEPEWRVVFY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHH STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure TSGWMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TVHAGTHVWRGLSGFLALVLFFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHHHHHHHHHHHHHHHCCCCC TGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVAYVNVKRLGKLGEPEWRVVFY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH FTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEHHHHH STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGIWAVRASAPARPESL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]