| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cya [H]
Identifier: 74316689
GI number: 74316689
Start: 712034
End: 713815
Strand: Direct
Name: cya [H]
Synonym: Tbd_0671
Alternate gene names: 74316689
Gene position: 712034-713815 (Clockwise)
Preceding gene: 74316688
Following gene: 74316693
Centisome position: 24.47
GC content: 67.12
Gene sequence:
>1782_bases TTGGACGAACCGGCCCGCTGCGCTAGGGTTGAGGGTATCGAGCAGCCAGGAGATCGCGTGCGCCTTCCCATCAGCCTGAA GATCTTCAGCATCACGACCGCACTCCTTGTGCTGATGGTCGCCGTCACCTGGCTCTCGGTGCTCAATTTCCGGCATCTCA ACGGCCAGGTCCGCGCGCTTTCGGACTGGTACCTGCCGCTCGAGCAGCAGGTCGCGAGCGTCGAAATCCTGATCCGTCAG CAGATGGTGCACATGGAGCGGGTCATGGCCGGCATCGAAGCAGCGCGGCCCGACCCCGACTATCTGGCGCGGGAGTCGAC CAGCTTCGATGCGCGCGGCGTCAACGCCGACCAGATCATCGATTCCTCGCTGCGCTTTCTCGCCGAGGCCGACGCCGAGA AGGCGATCGATCTCGACCGCGTGACGCTCGCCAAGCTGGCCGAGCAGTTGCCGGCGATCCAGACCGCGCGCCAGCAGTTC CACCGCACCTTCCGCCTGTTCCAGATCGAGGCCGAGGAAGGCACGCCGCGCTCGCAGAACCTCGTGCGCGACGCTCTGCT GCGCGAGAAGGACCGGGTCGACGTCGAGATCGGCAAGACCATCGAGCTCCTCGCCAAGCTCACGCAGGACACCGCTGCCG CGGCCAAGGCCGAGGAGGCGCGCGCGACCACGCTGAACTGGATCGTGACCGGCGTCGCCACCCTGCTGGGTCTCATCTTC GCGACCTTCGTCACGCGCTCGCTCGTCGACTCGGTCCGGCGCCTGGTAGGCGGCACCCAGGCCGTCGAAGCCGGCGACCT CGGCGTCGAGATCCGCGTGCGCACGCGCGACGAGATGGCGACGCTGGCAAGCTCGTTCAACCACATGGTCCTCGGCCTGC GCGAGAAGGAGCGCATCCGCGAAACCTTCGGCCAGTACGTCGACCCGCGCATCGTCAAGAGCCTGCTCGACAACCGCATC GCGGCGGACCGCGGGCAGCGCGAGGTCATGACCGTGTTCTTCTCCGACCTCGAAGGCTTCACGCGCATGTGCGAGGACCT CACGCCTGACGCGGCAGTCCGCTTCCTCAACCGCTACTTCGCGATGATGTCCGAGGTCATCCGCGGCCGTCAGGGCATCG TCGACAAGTACATCGGCGATTCCGTCATGGCGTTCTGGGGTCCGCCGTTCACCGACGCGAAAGGCCACGCGCAGCTCGGC TGCCTCGCCGCACTCGACCAGATGGCGAAGATGGACGCCTTCCGCGCCAGCCTGCCCGAGCTTTTCGGCGTCAAACACGG CCTGCCCGACGTCCAGGTGCGCATGGGCATCGCGAGCGGCGAGGTCACCGTCGGCAACATCGGCTCGGAAACCTCGCGCG GCTACACCGTCATCGGCGACACCGTGAACCTCGCCTCACGCCTCGAGCAGGCCAACAAGTTCTACGGCACGCGCATCCTC GTCAGCGAGGGCACGCGAAAGCTCGCCGGGGATGACTTCGCCGTCCGCGAAATCGACAGCCTGCGCGTCGCCGGCAAGCT GCAGCCCGTGCGTGTGTACGAATTGCTCGGCATGGCGAACGAATTGAGCGAAGCGAGCCGGCTGGCCGTCACGGCGTACG AAGCCGGGCTCGCTCGTTATCGTGCGGAAGACTGGACGGCGGCTGAAGCGGCGTTCAGGGAATGTCTGGCGAAGGCGCCG GGCGATCGGCCCAGTGCGGTGATGCTGGCGCGGGTCGAGGCGTTCAGGAAAGCACCGCCGGTGGCCGGGTGGAAGGGGGT CTGGGTGGCGGGGAGCAAGTGA
Upstream 100 bases:
>100_bases ACGGCTGAAGCGGCTGAAGCGGTCCTACGCGGGCAGACGCTGTCGGACGAGGGGCTGAGCGCTGGCCGGCGCCGACCGCC GTTTACGGCGTTCCCCGCGC
Downstream 100 bases:
>100_bases TCTTCTGATACTGAGGCCATCACGCTTCCTCCTGCGGATTCTTCATGCGGCCTGTTCCATCGCATGACATCGCGCTCGAT CTGCGCGCCATGCTCGGCCA
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MDEPARCARVEGIEQPGDRVRLPISLKIFSITTALLVLMVAVTWLSVLNFRHLNGQVRALSDWYLPLEQQVASVEILIRQ QMVHMERVMAGIEAARPDPDYLARESTSFDARGVNADQIIDSSLRFLAEADAEKAIDLDRVTLAKLAEQLPAIQTARQQF HRTFRLFQIEAEEGTPRSQNLVRDALLREKDRVDVEIGKTIELLAKLTQDTAAAAKAEEARATTLNWIVTGVATLLGLIF ATFVTRSLVDSVRRLVGGTQAVEAGDLGVEIRVRTRDEMATLASSFNHMVLGLREKERIRETFGQYVDPRIVKSLLDNRI AADRGQREVMTVFFSDLEGFTRMCEDLTPDAAVRFLNRYFAMMSEVIRGRQGIVDKYIGDSVMAFWGPPFTDAKGHAQLG CLAALDQMAKMDAFRASLPELFGVKHGLPDVQVRMGIASGEVTVGNIGSETSRGYTVIGDTVNLASRLEQANKFYGTRIL VSEGTRKLAGDDFAVREIDSLRVAGKLQPVRVYELLGMANELSEASRLAVTAYEAGLARYRAEDWTAAEAAFRECLAKAP GDRPSAVMLARVEAFRKAPPVAGWKGVWVAGSK
Sequences:
>Translated_593_residues MDEPARCARVEGIEQPGDRVRLPISLKIFSITTALLVLMVAVTWLSVLNFRHLNGQVRALSDWYLPLEQQVASVEILIRQ QMVHMERVMAGIEAARPDPDYLARESTSFDARGVNADQIIDSSLRFLAEADAEKAIDLDRVTLAKLAEQLPAIQTARQQF HRTFRLFQIEAEEGTPRSQNLVRDALLREKDRVDVEIGKTIELLAKLTQDTAAAAKAEEARATTLNWIVTGVATLLGLIF ATFVTRSLVDSVRRLVGGTQAVEAGDLGVEIRVRTRDEMATLASSFNHMVLGLREKERIRETFGQYVDPRIVKSLLDNRI AADRGQREVMTVFFSDLEGFTRMCEDLTPDAAVRFLNRYFAMMSEVIRGRQGIVDKYIGDSVMAFWGPPFTDAKGHAQLG CLAALDQMAKMDAFRASLPELFGVKHGLPDVQVRMGIASGEVTVGNIGSETSRGYTVIGDTVNLASRLEQANKFYGTRIL VSEGTRKLAGDDFAVREIDSLRVAGKLQPVRVYELLGMANELSEASRLAVTAYEAGLARYRAEDWTAAEAAFRECLAKAP GDRPSAVMLARVEAFRKAPPVAGWKGVWVAGSK >Mature_593_residues MDEPARCARVEGIEQPGDRVRLPISLKIFSITTALLVLMVAVTWLSVLNFRHLNGQVRALSDWYLPLEQQVASVEILIRQ QMVHMERVMAGIEAARPDPDYLARESTSFDARGVNADQIIDSSLRFLAEADAEKAIDLDRVTLAKLAEQLPAIQTARQQF HRTFRLFQIEAEEGTPRSQNLVRDALLREKDRVDVEIGKTIELLAKLTQDTAAAAKAEEARATTLNWIVTGVATLLGLIF ATFVTRSLVDSVRRLVGGTQAVEAGDLGVEIRVRTRDEMATLASSFNHMVLGLREKERIRETFGQYVDPRIVKSLLDNRI AADRGQREVMTVFFSDLEGFTRMCEDLTPDAAVRFLNRYFAMMSEVIRGRQGIVDKYIGDSVMAFWGPPFTDAKGHAQLG CLAALDQMAKMDAFRASLPELFGVKHGLPDVQVRMGIASGEVTVGNIGSETSRGYTVIGDTVNLASRLEQANKFYGTRIL VSEGTRKLAGDDFAVREIDSLRVAGKLQPVRVYELLGMANELSEASRLAVTAYEAGLARYRAEDWTAAEAAFRECLAKAP GDRPSAVMLARVEAFRKAPPVAGWKGVWVAGSK
Specific function: May function as a membrane-localized receptor protein [H]
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
Organism=Homo sapiens, GI167830411, Length=194, Percent_Identity=32.4742268041237, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI134152694, Length=192, Percent_Identity=29.6875, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI222080083, Length=164, Percent_Identity=31.7073170731707, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI4580422, Length=192, Percent_Identity=30.2083333333333, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI4504217, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193206632, Length=239, Percent_Identity=29.2887029288703, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI212645052, Length=231, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17534659, Length=252, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32563954, Length=164, Percent_Identity=29.8780487804878, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71989822, Length=178, Percent_Identity=30.3370786516854, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71989805, Length=178, Percent_Identity=30.3370786516854, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17508769, Length=178, Percent_Identity=30.3370786516854, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193207841, Length=146, Percent_Identity=32.8767123287671, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17568383, Length=197, Percent_Identity=32.48730964467, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71982300, Length=208, Percent_Identity=27.4038461538462, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193206054, Length=213, Percent_Identity=30.9859154929577, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24663839, Length=238, Percent_Identity=30.672268907563, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24663843, Length=238, Percent_Identity=30.672268907563, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI62484298, Length=177, Percent_Identity=31.638418079096, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI62484477, Length=177, Percent_Identity=31.638418079096, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI116008008, Length=177, Percent_Identity=31.638418079096, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI221330470, Length=213, Percent_Identity=31.4553990610329, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI85725044, Length=153, Percent_Identity=35.2941176470588, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI221330468, Length=213, Percent_Identity=31.4553990610329, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI161076872, Length=181, Percent_Identity=30.3867403314917, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574512, Length=181, Percent_Identity=30.3867403314917, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI281366459, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281366457, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281366455, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI56292422, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI56292424, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24666940, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI161078020, Length=180, Percent_Identity=31.1111111111111, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647268, Length=168, Percent_Identity=29.7619047619048, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 65536; Mature: 65536
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEPARCARVEGIEQPGDRVRLPISLKIFSITTALLVLMVAVTWLSVLNFRHLNGQVRAL CCCCHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH SDWYLPLEQQVASVEILIRQQMVHMERVMAGIEAARPDPDYLARESTSFDARGVNADQII HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHH DSSLRFLAEADAEKAIDLDRVTLAKLAEQLPAIQTARQQFHRTFRLFQIEAEEGTPRSQN HHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHH LVRDALLREKDRVDVEIGKTIELLAKLTQDTAAAAKAEEARATTLNWIVTGVATLLGLIF HHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATFVTRSLVDSVRRLVGGTQAVEAGDLGVEIRVRTRDEMATLASSFNHMVLGLREKERIR HHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHH ETFGQYVDPRIVKSLLDNRIAADRGQREVMTVFFSDLEGFTRMCEDLTPDAAVRFLNRYF HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AMMSEVIRGRQGIVDKYIGDSVMAFWGPPFTDAKGHAQLGCLAALDQMAKMDAFRASLPE HHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFGVKHGLPDVQVRMGIASGEVTVGNIGSETSRGYTVIGDTVNLASRLEQANKFYGTRIL HHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCEEE VSEGTRKLAGDDFAVREIDSLRVAGKLQPVRVYELLGMANELSEASRLAVTAYEAGLARY EECCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAEDWTAAEAAFRECLAKAPGDRPSAVMLARVEAFRKAPPVAGWKGVWVAGSK HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCC >Mature Secondary Structure MDEPARCARVEGIEQPGDRVRLPISLKIFSITTALLVLMVAVTWLSVLNFRHLNGQVRAL CCCCHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH SDWYLPLEQQVASVEILIRQQMVHMERVMAGIEAARPDPDYLARESTSFDARGVNADQII HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHH DSSLRFLAEADAEKAIDLDRVTLAKLAEQLPAIQTARQQFHRTFRLFQIEAEEGTPRSQN HHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHH LVRDALLREKDRVDVEIGKTIELLAKLTQDTAAAAKAEEARATTLNWIVTGVATLLGLIF HHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATFVTRSLVDSVRRLVGGTQAVEAGDLGVEIRVRTRDEMATLASSFNHMVLGLREKERIR HHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHH ETFGQYVDPRIVKSLLDNRIAADRGQREVMTVFFSDLEGFTRMCEDLTPDAAVRFLNRYF HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AMMSEVIRGRQGIVDKYIGDSVMAFWGPPFTDAKGHAQLGCLAALDQMAKMDAFRASLPE HHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFGVKHGLPDVQVRMGIASGEVTVGNIGSETSRGYTVIGDTVNLASRLEQANKFYGTRIL HHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCEEE VSEGTRKLAGDDFAVREIDSLRVAGKLQPVRVYELLGMANELSEASRLAVTAYEAGLARY EECCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAEDWTAAEAAFRECLAKAPGDRPSAVMLARVEAFRKAPPVAGWKGVWVAGSK HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7601856 [H]