| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pepA [H]
Identifier: 74316674
GI number: 74316674
Start: 696819
End: 698279
Strand: Direct
Name: pepA [H]
Synonym: Tbd_0656
Alternate gene names: 74316674
Gene position: 696819-698279 (Clockwise)
Preceding gene: 74316665
Following gene: 74316676
Centisome position: 23.95
GC content: 67.35
Gene sequence:
>1461_bases ATGCTGCCCAAGCTTTCTCAAAACCGGCAGGAAATCAGCGCCACGACGCTCGAAGGCGCCAGCCATGTGTTGGTGCTGCT GCCGCTGACGAAGAATCTGCCCGATGTGGCCGGAAACGCCGCGCTCAAGGCGGTGATGAAGCGGCGGAATATCAAGGTCG ACGCGCTCGCGAAGTCGCCGGTCGCCGTCCAGTTGCCCGGCGGCACGCTCGCGGTCTACGCGATGCTGAAGTCCGCCGCG AACACATTCGACACGCACGAGCAGCTGCGCAAGGCGCTCGCCCTGCTGCTCGGCGAGCATCCGAAGATCGTCACGCTCGC GGTCTTCGGCGACGCCGCGTTCCGGGGGCGGATCGCCGAAGCAGCGGTCTACACGACCTGGGTCAATGCCGTGCCGCTGC CCTCGCGCAAATCGAAGAGCGATCCGGCGCTCAAGGCGATCGAGCTCTTCGGCTACAAATCGGCCGATGGCTTCAGCCGC GCGCAGGCGCTCGCCGAAGGCAACACGCTCACCCGCAGCCTGACCGTGCAAGGCCCCGACGAACTCACGCCCGGGGTGTA TCGCAAGCGCATCAAGGCGCTTGCCAAGGAATACGGGTGGACCGTCGAGGAATACGGTTTCGACAAACTGAAGGCCATGG GCGCCGGCGCGTTCTGCGCGGTCGCCCAGGGCTCGCCGGCGAAGGACGCGGCGATCGTGCGCGTGAGCTACAAGGGAACG GGCGCGAAGGGCAGGGGCAGGAAGATCGCCTTCGTCGGCAAGGGCATCTGCTTCGACACCGGCGGCCACAACCTCAAGCC GGCCAAGTACATGCAGGGCATGCACGAGGACATGAACGGTTCGGCGGTCGTGCTCGGCATTCTCGCCGCGGCGTCACGGA TGAAGCTGCCGGTGGCACTGGAGGGCTGGGTCGCGCTCGCCGAGAACCACATCAGCCCGCAGGCCTACCGCCAGAACGAG GTCGTCACGGCGCTCAACGGCACCTCGATCGAAGTCGTCCACACCGACGCCGAAGGCCGCATGGTGCTCGCCGACACACT GACCCTCGCCGCGCGCGGCAAGCCCGAGCTCATCGCCGATTTCGCCACCCTGACCGGCTCGATGCACTACGCCCTCGGCA GCCGCATGTCGGGTGTGTTCGCGTCCTCCGACGCGCTCGCGCAGGCGGCCACCCGCGCGGCGGCCGCGAGCGGCGAACGC ATCGTCGTCTTTCCGCATCCCGAGGATTACGACAGCGCGCTCGACTCGACCGTCGCCGACGTCAAGCAGTGCACGATGGA AGGCGAGGCCGATCACATCCTCGCCGCGCGTCTGCTCTCGCGCTTCGTCGGCGAGACACCGTGGTTGCACATGGACTTGT CGGCGCACAGCTGCAAGGGCGGGCTCGGTGCCGTCATGAGTGACGCCAACGGCTTCGGCGTCGCTTGGGCGCTCGCCTTG CTGGACGGCCTGAAGGGCTGA
Upstream 100 bases:
>100_bases TGTCGGACGGGCTCGGAAAAAGCGCCGGGAAAATGCAAACGCGCAATTATCCGAGAAACCCCGTCGACCATCAAGAAAAC GCCTCTCCCAAGGATTGCCT
Downstream 100 bases:
>100_bases GCGCTTTTCCCGGTCGGCGCTACGGCGCGTGCGTCACGTCACCGGCCCAGCTCAACGCGGCCGACACGGTGGGAAAGCCG ACGGTGCTGGTGAGGAGGAC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MLPKLSQNRQEISATTLEGASHVLVLLPLTKNLPDVAGNAALKAVMKRRNIKVDALAKSPVAVQLPGGTLAVYAMLKSAA NTFDTHEQLRKALALLLGEHPKIVTLAVFGDAAFRGRIAEAAVYTTWVNAVPLPSRKSKSDPALKAIELFGYKSADGFSR AQALAEGNTLTRSLTVQGPDELTPGVYRKRIKALAKEYGWTVEEYGFDKLKAMGAGAFCAVAQGSPAKDAAIVRVSYKGT GAKGRGRKIAFVGKGICFDTGGHNLKPAKYMQGMHEDMNGSAVVLGILAAASRMKLPVALEGWVALAENHISPQAYRQNE VVTALNGTSIEVVHTDAEGRMVLADTLTLAARGKPELIADFATLTGSMHYALGSRMSGVFASSDALAQAATRAAAASGER IVVFPHPEDYDSALDSTVADVKQCTMEGEADHILAARLLSRFVGETPWLHMDLSAHSCKGGLGAVMSDANGFGVAWALAL LDGLKG
Sequences:
>Translated_486_residues MLPKLSQNRQEISATTLEGASHVLVLLPLTKNLPDVAGNAALKAVMKRRNIKVDALAKSPVAVQLPGGTLAVYAMLKSAA NTFDTHEQLRKALALLLGEHPKIVTLAVFGDAAFRGRIAEAAVYTTWVNAVPLPSRKSKSDPALKAIELFGYKSADGFSR AQALAEGNTLTRSLTVQGPDELTPGVYRKRIKALAKEYGWTVEEYGFDKLKAMGAGAFCAVAQGSPAKDAAIVRVSYKGT GAKGRGRKIAFVGKGICFDTGGHNLKPAKYMQGMHEDMNGSAVVLGILAAASRMKLPVALEGWVALAENHISPQAYRQNE VVTALNGTSIEVVHTDAEGRMVLADTLTLAARGKPELIADFATLTGSMHYALGSRMSGVFASSDALAQAATRAAAASGER IVVFPHPEDYDSALDSTVADVKQCTMEGEADHILAARLLSRFVGETPWLHMDLSAHSCKGGLGAVMSDANGFGVAWALAL LDGLKG >Mature_486_residues MLPKLSQNRQEISATTLEGASHVLVLLPLTKNLPDVAGNAALKAVMKRRNIKVDALAKSPVAVQLPGGTLAVYAMLKSAA NTFDTHEQLRKALALLLGEHPKIVTLAVFGDAAFRGRIAEAAVYTTWVNAVPLPSRKSKSDPALKAIELFGYKSADGFSR AQALAEGNTLTRSLTVQGPDELTPGVYRKRIKALAKEYGWTVEEYGFDKLKAMGAGAFCAVAQGSPAKDAAIVRVSYKGT GAKGRGRKIAFVGKGICFDTGGHNLKPAKYMQGMHEDMNGSAVVLGILAAASRMKLPVALEGWVALAENHISPQAYRQNE VVTALNGTSIEVVHTDAEGRMVLADTLTLAARGKPELIADFATLTGSMHYALGSRMSGVFASSDALAQAATRAAAASGER IVVFPHPEDYDSALDSTVADVKQCTMEGEADHILAARLLSRFVGETPWLHMDLSAHSCKGGLGAVMSDANGFGVAWALAL LDGLKG
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=323, Percent_Identity=33.1269349845201, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI47155554, Length=368, Percent_Identity=30.1630434782609, Blast_Score=122, Evalue=6e-28, Organism=Escherichia coli, GI1790710, Length=256, Percent_Identity=35.9375, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI87082123, Length=270, Percent_Identity=36.2962962962963, Blast_Score=138, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17556903, Length=284, Percent_Identity=30.2816901408451, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17565172, Length=366, Percent_Identity=28.4153005464481, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI21355725, Length=322, Percent_Identity=31.3664596273292, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24661038, Length=339, Percent_Identity=30.3834808259587, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI161077148, Length=337, Percent_Identity=28.486646884273, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI20130057, Length=337, Percent_Identity=28.486646884273, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI20129969, Length=323, Percent_Identity=29.1021671826625, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI19922386, Length=336, Percent_Identity=28.8690476190476, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24662227, Length=335, Percent_Identity=26.865671641791, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI21355645, Length=335, Percent_Identity=27.1641791044776, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24662223, Length=335, Percent_Identity=27.1641791044776, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI21357381, Length=310, Percent_Identity=30, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI221379063, Length=312, Percent_Identity=30.1282051282051, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI221379062, Length=312, Percent_Identity=30.1282051282051, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI20129963, Length=322, Percent_Identity=27.9503105590062, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24646701, Length=264, Percent_Identity=27.6515151515151, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24646703, Length=264, Percent_Identity=27.6515151515151, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI21358201, Length=264, Percent_Identity=27.6515151515151, Blast_Score=79, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 51279; Mature: 51279
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKLSQNRQEISATTLEGASHVLVLLPLTKNLPDVAGNAALKAVMKRRNIKVDALAKSP CCCCCCCCHHHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC VAVQLPGGTLAVYAMLKSAANTFDTHEQLRKALALLLGEHPKIVTLAVFGDAAFRGRIAE EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCHHHH AAVYTTWVNAVPLPSRKSKSDPALKAIELFGYKSADGFSRAQALAEGNTLTRSLTVQGPD HHHEEHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEEECCCC ELTPGVYRKRIKALAKEYGWTVEEYGFDKLKAMGAGAFCAVAQGSPAKDAAIVRVSYKGT CCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCC GAKGRGRKIAFVGKGICFDTGGHNLKPAKYMQGMHEDMNGSAVVLGILAAASRMKLPVAL CCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEH EGWVALAENHISPQAYRQNEVVTALNGTSIEVVHTDAEGRMVLADTLTLAARGKPELIAD HHHHHHHHCCCCCHHHCCCCEEEEECCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHH FATLTGSMHYALGSRMSGVFASSDALAQAATRAAAASGERIVVFPHPEDYDSALDSTVAD HHHHHCCHHHHHHCHHCCCEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH VKQCTMEGEADHILAARLLSRFVGETPWLHMDLSAHSCKGGLGAVMSDANGFGVAWALAL HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHH LDGLKG HHHCCC >Mature Secondary Structure MLPKLSQNRQEISATTLEGASHVLVLLPLTKNLPDVAGNAALKAVMKRRNIKVDALAKSP CCCCCCCCHHHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC VAVQLPGGTLAVYAMLKSAANTFDTHEQLRKALALLLGEHPKIVTLAVFGDAAFRGRIAE EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCHHHH AAVYTTWVNAVPLPSRKSKSDPALKAIELFGYKSADGFSRAQALAEGNTLTRSLTVQGPD HHHEEHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEEECCCC ELTPGVYRKRIKALAKEYGWTVEEYGFDKLKAMGAGAFCAVAQGSPAKDAAIVRVSYKGT CCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCC GAKGRGRKIAFVGKGICFDTGGHNLKPAKYMQGMHEDMNGSAVVLGILAAASRMKLPVAL CCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEH EGWVALAENHISPQAYRQNEVVTALNGTSIEVVHTDAEGRMVLADTLTLAARGKPELIAD HHHHHHHHCCCCCHHHCCCCEEEEECCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHH FATLTGSMHYALGSRMSGVFASSDALAQAATRAAAASGERIVVFPHPEDYDSALDSTVAD HHHHHCCHHHHHHCHHCCCEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH VKQCTMEGEADHILAARLLSRFVGETPWLHMDLSAHSCKGGLGAVMSDANGFGVAWALAL HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHH LDGLKG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA