| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316585
Identifier: 74316585
GI number: 74316585
Start: 595314
End: 595676
Strand: Reverse
Name: 74316585
Synonym: Tbd_0567
Alternate gene names: NA
Gene position: 595676-595314 (Counterclockwise)
Preceding gene: 74316586
Following gene: 74316584
Centisome position: 20.47
GC content: 62.53
Gene sequence:
>363_bases ATGCGTAAGTTGCACCAGCTAATCACGGCCTGCGCGCTCGGCACCATCGCGCTGACGGGCAACGCGCTCGCCGCGGAGCC CGCCAAGGAACCGAGCGGCAAGGAACTCGCATTCAACAACAAGAAAGGCAACTGCCTCGCGTGTCACGGCATGCCGACGG TGCCCGACGCAGTCTCGACCGGCATGTACGGTCCACCGCTGATCGCGATGAGCGCACGTTACCCGGACAAGGCCAAGCTG CGGGCCCAGATCTGGGACGCCACCGTGGCGAACCCTTCCACCACGATGATTCCCTTTGGCAAGCACGGGGTGTTGACGGA AGCCGAAATCGATAAGGTGACCGACTTCGTGTACGGTCTGTAA
Upstream 100 bases:
>100_bases CCACTATGCTTCGTCTCATCCATGAGATGTGGATAGCGCTCACTGCACGTTTGCCCCGGGGGGCGCTTTCATCACCACGT AAAAAATTAGGAGGATGACA
Downstream 100 bases:
>100_bases TCATCCCTTGCATTGTTAATTCAGGAGATACACTCAATGAATGCACTTCGTAGAAACGTACTGAAAAGCGCTGCCGGCGC CGGTACTGTGGCCGTCGCCG
Product: monoheme cytochrome SoxX
Products: NA
Alternate protein names: Sulfur Oxidation Protein SoxX; Monoheme Cytochrome SoxX; Sulfur Oxidation Protein; Cytochrome C
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MRKLHQLITACALGTIALTGNALAAEPAKEPSGKELAFNNKKGNCLACHGMPTVPDAVSTGMYGPPLIAMSARYPDKAKL RAQIWDATVANPSTTMIPFGKHGVLTEAEIDKVTDFVYGL
Sequences:
>Translated_120_residues MRKLHQLITACALGTIALTGNALAAEPAKEPSGKELAFNNKKGNCLACHGMPTVPDAVSTGMYGPPLIAMSARYPDKAKL RAQIWDATVANPSTTMIPFGKHGVLTEAEIDKVTDFVYGL >Mature_120_residues MRKLHQLITACALGTIALTGNALAAEPAKEPSGKELAFNNKKGNCLACHGMPTVPDAVSTGMYGPPLIAMSARYPDKAKL RAQIWDATVANPSTTMIPFGKHGVLTEAEIDKVTDFVYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12713; Mature: 12713
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLHQLITACALGTIALTGNALAAEPAKEPSGKELAFNNKKGNCLACHGMPTVPDAVST CCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHC GMYGPPLIAMSARYPDKAKLRAQIWDATVANPSTTMIPFGKHGVLTEAEIDKVTDFVYGL CCCCCCEEEEECCCCCCHHHEEHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRKLHQLITACALGTIALTGNALAAEPAKEPSGKELAFNNKKGNCLACHGMPTVPDAVST CCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHC GMYGPPLIAMSARYPDKAKLRAQIWDATVANPSTTMIPFGKHGVLTEAEIDKVTDFVYGL CCCCCCEEEEECCCCCCHHHEEHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA