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The map label for this gene is yfgC [C]

Identifier: 74316586

GI number: 74316586

Start: 595820

End: 597376

Strand: Reverse

Name: yfgC [C]

Synonym: Tbd_0568

Alternate gene names: 74316586

Gene position: 597376-595820 (Counterclockwise)

Preceding gene: 74316595

Following gene: 74316585

Centisome position: 20.53

GC content: 66.28

Gene sequence:

>1557_bases
TTGCTGGGAACCTTGTGTCGATTCACGAATCGTAAACCAAATGTCTACTCCCGCCTCGACTTTGGCCCGCGTGCGCTGCT
GATGCTGCGATTGCTGCTCGCCATGCTGTTGGCGGCCCAACCCGCCGCTGCCGTCGACCTGCCCGAACTTGGGGAAGTGT
CGCGTCAATACTTTTCCGATCAGGAGGAACAGGCGCTGGGACGCGCGATCATGCGCGACGTCTACGTCGACCCGCGCTAC
CTCGACGATCCCGAGATCGAAACCTACCTCGGCCAACTCGGCTACAAGCTCGTTTCCGTCAGCACGCGCAATCAACGCGA
ATTCAACTTCTTCGTCGTCGACGACCCGAGCATCAATGCCTTCGCGATGCCGGGCGGCAACGTCGGCGTGCACACCGGGC
TGCTGCTCGCGGCGCAAAGCGAATCCGAACTCGCCGGCGTGATCGCCCACGAAATCGCCCACGTGACCCAGGACCATATC
GCGCGGATGGTCGCGGCGCAGAGCCAGAGCCAGTGGCCGACGCTGGCGGCGCTTGCGCTTGCCCTGCTCGCGTCCCGTTC
CAACCCGAATATCGCGAGCGCGGCGATCGCGTCGAGCCAGGCCTACTCCATCCAGAACCAGCTCAACTACAGCCGGGACT
ACGAGCGTGAAGCCGATCGCCTGGGCTACGACATGCTGACCCGCGCGGACTACGACGCGCGCGGAATGAGCGGCTTCTTC
AATCGGCTGCAGCGTGCGAACCGCTTCTACGACAGCAGCGCGCCGGCCTATCTGCGCACGCACCCGCTCACGACCGAGCG
TATCGCCGACATGGAGGCGCGCAGCGAGGCGGCGCCCTATCACCAGAAAGAGGACAGCCTCGACTTCCAGCTGGTGCGCG
CGCGCCTGCGCGCCCGCGAGGGCAGCCCGCAGGACGCCGTGCTCGCGGCGCGCGCCGCGCTGAAGGAAAAACGCCACAGC
AGCGCGGTGGCCGCGCGTTACGGCCTGGTCGTGGCGCTCATGCGCGCGCGCCAATTCAAAGACGCGGAGCGCGAGGCGCA
AACCCTGCTCGGCGGGGCGACGGCACATCCGATGGTCACGCAAGTCGCCGCCCAATCCGCACTTGCCGCGGGCAACCCGG
CACTCGCGCTGCAGCGCTACGAGGCAGGTACCGCCGCCTTCCCGGGATACCGGCCGCTGCAGTACGGCTATGTCCGTGCA
CTGCTCGACGCGCGGAAAAACAAGGATGCGTTGCGTCAGGTCGACACACAGCTCGCCCTGTATCCTCTTGACCGCCGCTT
GTGGCGACAGGCCGCCGAAGTGCACGCACGTCTGGGGCATCGCCTGCTGAGCCATCAGGCGATGGCCGAATCGCTCGCGC
TCGGGGGCAACCTGGTCGGCGCGATCGAGCAGGTCTCGCTCGGCATCAAGGCCGGCGACGGCAGCTTTCATGAACTCTCG
GCCGCCGAAGCAAAGCGCCGCGAGTGGCAGGAAGCCGAAAAGGCGCAGCGCAAAGACGGCCAGCCGGCGGGGTCTTCGCG
CGCGTTCGATGCTGGTAGGAAATTACCTCGAGAATAG

Upstream 100 bases:

>100_bases
ATGGCGCCGCGTGCCGTGGCAACACGGCGGGTGTCGTCCTTGCCCGCCACGTCGACCATGATGGCGCGGCCGCTTTCGTC
AAAATGGGTAAACTCGCTCA

Downstream 100 bases:

>100_bases
GTTCGAAAAACGCTTGCCCGGTATTGCATGGCAAAAAGCAATTCCACTATGCTTCGTCTCATCCATGAGATGTGGATAGC
GCTCACTGCACGTTTGCCCC

Product: M48 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MLGTLCRFTNRKPNVYSRLDFGPRALLMLRLLLAMLLAAQPAAAVDLPELGEVSRQYFSDQEEQALGRAIMRDVYVDPRY
LDDPEIETYLGQLGYKLVSVSTRNQREFNFFVVDDPSINAFAMPGGNVGVHTGLLLAAQSESELAGVIAHEIAHVTQDHI
ARMVAAQSQSQWPTLAALALALLASRSNPNIASAAIASSQAYSIQNQLNYSRDYEREADRLGYDMLTRADYDARGMSGFF
NRLQRANRFYDSSAPAYLRTHPLTTERIADMEARSEAAPYHQKEDSLDFQLVRARLRAREGSPQDAVLAARAALKEKRHS
SAVAARYGLVVALMRARQFKDAEREAQTLLGGATAHPMVTQVAAQSALAAGNPALALQRYEAGTAAFPGYRPLQYGYVRA
LLDARKNKDALRQVDTQLALYPLDRRLWRQAAEVHARLGHRLLSHQAMAESLALGGNLVGAIEQVSLGIKAGDGSFHELS
AAEAKRREWQEAEKAQRKDGQPAGSSRAFDAGRKLPRE

Sequences:

>Translated_518_residues
MLGTLCRFTNRKPNVYSRLDFGPRALLMLRLLLAMLLAAQPAAAVDLPELGEVSRQYFSDQEEQALGRAIMRDVYVDPRY
LDDPEIETYLGQLGYKLVSVSTRNQREFNFFVVDDPSINAFAMPGGNVGVHTGLLLAAQSESELAGVIAHEIAHVTQDHI
ARMVAAQSQSQWPTLAALALALLASRSNPNIASAAIASSQAYSIQNQLNYSRDYEREADRLGYDMLTRADYDARGMSGFF
NRLQRANRFYDSSAPAYLRTHPLTTERIADMEARSEAAPYHQKEDSLDFQLVRARLRAREGSPQDAVLAARAALKEKRHS
SAVAARYGLVVALMRARQFKDAEREAQTLLGGATAHPMVTQVAAQSALAAGNPALALQRYEAGTAAFPGYRPLQYGYVRA
LLDARKNKDALRQVDTQLALYPLDRRLWRQAAEVHARLGHRLLSHQAMAESLALGGNLVGAIEQVSLGIKAGDGSFHELS
AAEAKRREWQEAEKAQRKDGQPAGSSRAFDAGRKLPRE
>Mature_518_residues
MLGTLCRFTNRKPNVYSRLDFGPRALLMLRLLLAMLLAAQPAAAVDLPELGEVSRQYFSDQEEQALGRAIMRDVYVDPRY
LDDPEIETYLGQLGYKLVSVSTRNQREFNFFVVDDPSINAFAMPGGNVGVHTGLLLAAQSESELAGVIAHEIAHVTQDHI
ARMVAAQSQSQWPTLAALALALLASRSNPNIASAAIASSQAYSIQNQLNYSRDYEREADRLGYDMLTRADYDARGMSGFF
NRLQRANRFYDSSAPAYLRTHPLTTERIADMEARSEAAPYHQKEDSLDFQLVRARLRAREGSPQDAVLAARAALKEKRHS
SAVAARYGLVVALMRARQFKDAEREAQTLLGGATAHPMVTQVAAQSALAAGNPALALQRYEAGTAAFPGYRPLQYGYVRA
LLDARKNKDALRQVDTQLALYPLDRRLWRQAAEVHARLGHRLLSHQAMAESLALGGNLVGAIEQVSLGIKAGDGSFHELS
AAEAKRREWQEAEKAQRKDGQPAGSSRAFDAGRKLPRE

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=223, Percent_Identity=26.9058295964126, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1788840, Length=443, Percent_Identity=29.3453724604966, Blast_Score=155, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 57104; Mature: 57104

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTLCRFTNRKPNVYSRLDFGPRALLMLRLLLAMLLAAQPAAAVDLPELGEVSRQYFSD
CCCCHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
QEEQALGRAIMRDVYVDPRYLDDPEIETYLGQLGYKLVSVSTRNQREFNFFVVDDPSINA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCCE
FAMPGGNVGVHTGLLLAAQSESELAGVIAHEIAHVTQDHIARMVAAQSQSQWPTLAALAL
EECCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALLASRSNPNIASAAIASSQAYSIQNQLNYSRDYEREADRLGYDMLTRADYDARGMSGFF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCHHHHHH
NRLQRANRFYDSSAPAYLRTHPLTTERIADMEARSEAAPYHQKEDSLDFQLVRARLRARE
HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GSPQDAVLAARAALKEKRHSSAVAARYGLVVALMRARQFKDAEREAQTLLGGATAHPMVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QVAAQSALAAGNPALALQRYEAGTAAFPGYRPLQYGYVRALLDARKNKDALRQVDTQLAL
HHHHHHHHHCCCCHHEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YPLDRRLWRQAAEVHARLGHRLLSHQAMAESLALGGNLVGAIEQVSLGIKAGDGSFHELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCHHHHH
AAEAKRREWQEAEKAQRKDGQPAGSSRAFDAGRKLPRE
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MLGTLCRFTNRKPNVYSRLDFGPRALLMLRLLLAMLLAAQPAAAVDLPELGEVSRQYFSD
CCCCHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
QEEQALGRAIMRDVYVDPRYLDDPEIETYLGQLGYKLVSVSTRNQREFNFFVVDDPSINA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCCE
FAMPGGNVGVHTGLLLAAQSESELAGVIAHEIAHVTQDHIARMVAAQSQSQWPTLAALAL
EECCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALLASRSNPNIASAAIASSQAYSIQNQLNYSRDYEREADRLGYDMLTRADYDARGMSGFF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCHHHHHH
NRLQRANRFYDSSAPAYLRTHPLTTERIADMEARSEAAPYHQKEDSLDFQLVRARLRARE
HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GSPQDAVLAARAALKEKRHSSAVAARYGLVVALMRARQFKDAEREAQTLLGGATAHPMVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QVAAQSALAAGNPALALQRYEAGTAAFPGYRPLQYGYVRALLDARKNKDALRQVDTQLAL
HHHHHHHHHCCCCHHEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
YPLDRRLWRQAAEVHARLGHRLLSHQAMAESLALGGNLVGAIEQVSLGIKAGDGSFHELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCHHHHH
AAEAKRREWQEAEKAQRKDGQPAGSSRAFDAGRKLPRE
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]