| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316582
Identifier: 74316582
GI number: 74316582
Start: 593535
End: 594380
Strand: Reverse
Name: 74316582
Synonym: Tbd_0564
Alternate gene names: NA
Gene position: 594380-593535 (Counterclockwise)
Preceding gene: 74316583
Following gene: 74316581
Centisome position: 20.43
GC content: 62.53
Gene sequence:
>846_bases ATGAAACAACAAATCATTACGAAGCTGCTGACCGGCATGGCCGGACTGGGCATCGCACTCGGCGCCGCGACGGCATACGC CTCGCCCGAGTCGGATCGCCAGGAATTCATCCAGTACTACACGTCGAAGTACCCCAACATCAAGCTTGAGGACTACGTCT ACGGCGCACTCGCCTTCGACGCCGACAGCAAGGCCCAGTACGAGGCCATCATGGAATTCCCGCCCTTCGAAGCGGAGATC GAGGCGGGCCAGACCTTGTGGGAAACCCCGTTCAAGAACGGCAAGACCTACGCCGACTGTCTGCCCAACGGCGGCCGCCA GATCGCTGGCAACTATCCGATGTTCGACGAGGCCAAGGGCAAGGTCGTGACGCTGGAGGCGGCGCTCAACGACTGCCGCG TCGCGAACGGCGAAGCGCCCTACAAGATCAGCGACAAGAACACGCTCGGCAAGCTCACCGCCTATATGCGCACGCTGTCC GACGGCATGCTGATGAACATCAGGGTGCAGAGCCCGAAAGCGATGGCCGCATATGAAGACGGCAAGAAGACCTTCTTCTC GCGCAAGGGCCAGCTGAATTTCGCCTGCGCCAGCTGCCACGTGCAGAACGCCGGCGTACGCCTGCGCTCCGAGCTGATCT CGCCCGCCGTCGGCCACGCCGTGCACTGGCCCGTGTTCCGCGGCGGAGACAATCTCGTGACGCTGCAGAACCGCTACACC GGCTGCTTCAAGCAGGTCCGCGCCGTGCCGCCCGCAGAAGGCAGCGAGACGATGAACAACCTGGAGTACTTCCACTCCTC GCTGTCCAACGGCCTGCCGATGAAGGCATCGGTGTTCCGCAAGTAA
Upstream 100 bases:
>100_bases GACAAGAACAGCGCCGAAGCGACCATCAGCTGATTCATGCGCGACACGAGCGGGGCAATGCCCCGCTCGCGCTTTATTCA TCAGGTTTCAGGAGGACGGC
Downstream 100 bases:
>100_bases ACACGCCTCGCGCACCCCGAGAAAAAAGCCCGGCCAACCGGGCTTTTTCTTTGTTCCATCGTGGAACATGGGCAGGAGCT ACTATTTACCGGGCTCGCCG
Product: diheme cytochrome SoxA
Products: NA
Alternate protein names: Diheme Cytochrome C; Sulfur Oxidation Protein SoxA; Diheme Cytochrome C SoxA; Sulfur Oxidation Protein; Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Secreted Protein-Like Protein; Chain G Soxax Complex; SoxA Protein; Sulfur Oxidation Diheme Cytochrome SoxA; Sulfur Oxidation
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFDADSKAQYEAIMEFPPFEAEI EAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKGKVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLS DGMLMNIRVQSPKAMAAYEDGKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK
Sequences:
>Translated_281_residues MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFDADSKAQYEAIMEFPPFEAEI EAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKGKVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLS DGMLMNIRVQSPKAMAAYEDGKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK >Mature_281_residues MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFDADSKAQYEAIMEFPPFEAEI EAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKGKVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLS DGMLMNIRVQSPKAMAAYEDGKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30963; Mature: 30963
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHEEEEEEEEC ADSKAQYEAIMEFPPFEAEIEAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKG CCCCHHHHHHHCCCCCCHHHHCCCHHHHCCCCCCCEEEHHCCCCCCEECCCCCCCCCCCC KVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLSDGMLMNIRVQSPKAMAAYED CEEEEEEHHCCCEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHC GKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT CHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHCCEEECCEEECCCCEEEECHHHH GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure MKQQIITKLLTGMAGLGIALGAATAYASPESDRQEFIQYYTSKYPNIKLEDYVYGALAFD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHEEEEEEEEC ADSKAQYEAIMEFPPFEAEIEAGQTLWETPFKNGKTYADCLPNGGRQIAGNYPMFDEAKG CCCCHHHHHHHCCCCCCHHHHCCCHHHHCCCCCCCEEEHHCCCCCCEECCCCCCCCCCCC KVVTLEAALNDCRVANGEAPYKISDKNTLGKLTAYMRTLSDGMLMNIRVQSPKAMAAYED CEEEEEEHHCCCEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHC GKKTFFSRKGQLNFACASCHVQNAGVRLRSELISPAVGHAVHWPVFRGGDNLVTLQNRYT CHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCHHHCCEEECCEEECCCCEEEECHHHH GCFKQVRAVPPAEGSETMNNLEYFHSSLSNGLPMKASVFRK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA