| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is exeA [H]
Identifier: 74316568
GI number: 74316568
Start: 576597
End: 577910
Strand: Reverse
Name: exeA [H]
Synonym: Tbd_0550
Alternate gene names: 74316568
Gene position: 577910-576597 (Counterclockwise)
Preceding gene: 74316569
Following gene: 74316567
Centisome position: 19.86
GC content: 69.33
Gene sequence:
>1314_bases GTGTATCTCGACTACTTCGGCCTGAAAGAAGCGCCCTTCCGCATCACGCCGAACACCGAGTACTGGTACGCCGGCGGCCA GCGTGGAGAAATCCTTGCGGCATTGCTCTACGCGATCGCGCACGGTGAAGGCATCATCAAGGTCGTCGGCGAGGTCGGCA GCGGCAAGACCATGCTGTGCCGCAAGCTCGCAGCCCAGCTTCCCGACGATGTCGACAGCGTCTACCTCGGCAATCCGTCG CTCGACCCCGACGACATGCTGGCCGCGATCCTCGCCGACCTCGGCGAAACCACGGCGAGCGGGCGGCACGCGCGCCTCGC CCAGCTCAACGCCGTGCTCCTCGCCCGGCACGAGGCGGGACGGCGCGTCGTCGTGTTCGTCGAGGAAGCGCAAGGCATTG CCCTCGACAAGCTCGAATTCCTGCGCCTTCTGACCAACCTCGAGACCGCCACTGACAAGCTCCTGCAAATCGTGTTGTTC GGCCAGCCGGAACTCGACACCCAGCTCGCCGACCCGCGCATCCGCCAGCTCAGGGACCGCATCACCCTGAGCCTCTACCT GTCGCCCCTGAACGAAGGCGAAGTCGGCGACTACCTGCGCGCCCGTCTTGCCGTTGCCGGCTACCGCGGGCCCGACCTGT TCTCGGAAGCCCTGATCGCGCGCCTCACACGCCTGTCCGCGGGACTGTCGCGGCGCATCAACGTGCTCGCCGACAAGACC CTGCTCGCAGCCTACGCCGCCCAGACCCACACCCTGACGCTCGCCCACCTCGACGCCGCGGCCGGCGACGCCGAGCTGCC GCAGACTCAACGCACCGCGCCGCGCCGCATGACGAATCGGCGTTGGGCCTGGCTGGGCGTGGGCGCGGTCGCGCTCGGAC TGCTCGCCTGGGCTGCCTGGCAAGCGCGCCCACAACCTTCCGCCGCGATCCCGGCGGCTGCGGCGGTTCCGGAGCCCGCC GTATCCCACGCTGTACGCGTCCTCGACGAGGCGCGCCTGACCCGGCAATGGCTCGCTGCCGCGGCGCCGGGCACCCATGT CATCCAGGTCGCTGCGGCTAAAGATGCGGCGCAGGCAGCCGTATTATTGGCAGGCCTGGATCCCAACACGCCACGGCCCG TGCGCGTGTTCTACGGACGCAGCCGGGGCGCCCCTGCCTGGATGATACTGGTCGGAGAATTCCCCGACCGTGACGCGGCG ACGACGGCCCTGCGCCAGCTGCCGGCCACGACGCCCGGCGTCGAGGCCCTGCGGGACGCGCCGTTTCTGCGCACCGTAAG GAAAATGCGCGCCGTGGCGCTGCCTACTGGATGA
Upstream 100 bases:
>100_bases GACGCACGGCAACCTGTCGCAGGCAGCGAAGCTGCTCGGCATCAACCGCACCACGCTCTACAGCCGCATGCAGACCTACG GAAGCGAATAGCCCTCGTCC
Downstream 100 bases:
>100_bases CGATGAACACTGGCTTGAAACGCTTTCGCTTGACGCTGCTCGCTGCCGTGGTGCTCACGAGCGGATGCGTGCCGCCGCGG GCGTTCGACACCTCGCCCGG
Product: ATPase, Type II secretory pathway component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MYLDYFGLKEAPFRITPNTEYWYAGGQRGEILAALLYAIAHGEGIIKVVGEVGSGKTMLCRKLAAQLPDDVDSVYLGNPS LDPDDMLAAILADLGETTASGRHARLAQLNAVLLARHEAGRRVVVFVEEAQGIALDKLEFLRLLTNLETATDKLLQIVLF GQPELDTQLADPRIRQLRDRITLSLYLSPLNEGEVGDYLRARLAVAGYRGPDLFSEALIARLTRLSAGLSRRINVLADKT LLAAYAAQTHTLTLAHLDAAAGDAELPQTQRTAPRRMTNRRWAWLGVGAVALGLLAWAAWQARPQPSAAIPAAAAVPEPA VSHAVRVLDEARLTRQWLAAAAPGTHVIQVAAAKDAAQAAVLLAGLDPNTPRPVRVFYGRSRGAPAWMILVGEFPDRDAA TTALRQLPATTPGVEALRDAPFLRTVRKMRAVALPTG
Sequences:
>Translated_437_residues MYLDYFGLKEAPFRITPNTEYWYAGGQRGEILAALLYAIAHGEGIIKVVGEVGSGKTMLCRKLAAQLPDDVDSVYLGNPS LDPDDMLAAILADLGETTASGRHARLAQLNAVLLARHEAGRRVVVFVEEAQGIALDKLEFLRLLTNLETATDKLLQIVLF GQPELDTQLADPRIRQLRDRITLSLYLSPLNEGEVGDYLRARLAVAGYRGPDLFSEALIARLTRLSAGLSRRINVLADKT LLAAYAAQTHTLTLAHLDAAAGDAELPQTQRTAPRRMTNRRWAWLGVGAVALGLLAWAAWQARPQPSAAIPAAAAVPEPA VSHAVRVLDEARLTRQWLAAAAPGTHVIQVAAAKDAAQAAVLLAGLDPNTPRPVRVFYGRSRGAPAWMILVGEFPDRDAA TTALRQLPATTPGVEALRDAPFLRTVRKMRAVALPTG >Mature_437_residues MYLDYFGLKEAPFRITPNTEYWYAGGQRGEILAALLYAIAHGEGIIKVVGEVGSGKTMLCRKLAAQLPDDVDSVYLGNPS LDPDDMLAAILADLGETTASGRHARLAQLNAVLLARHEAGRRVVVFVEEAQGIALDKLEFLRLLTNLETATDKLLQIVLF GQPELDTQLADPRIRQLRDRITLSLYLSPLNEGEVGDYLRARLAVAGYRGPDLFSEALIARLTRLSAGLSRRINVLADKT LLAAYAAQTHTLTLAHLDAAAGDAELPQTQRTAPRRMTNRRWAWLGVGAVALGLLAWAAWQARPQPSAAIPAAAAVPEPA VSHAVRVLDEARLTRQWLAAAAPGTHVIQVAAAKDAAQAAVLLAGLDPNTPRPVRVFYGRSRGAPAWMILVGEFPDRDAA TTALRQLPATTPGVEALRDAPFLRTVRKMRAVALPTG
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 47144; Mature: 47144
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLDYFGLKEAPFRITPNTEYWYAGGQRGEILAALLYAIAHGEGIIKVVGEVGSGKTMLC CCCCCCCCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH RKLAAQLPDDVDSVYLGNPSLDPDDMLAAILADLGETTASGRHARLAQLNAVLLARHEAG HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCC RRVVVFVEEAQGIALDKLEFLRLLTNLETATDKLLQIVLFGQPELDTQLADPRIRQLRDR CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHH ITLSLYLSPLNEGEVGDYLRARLAVAGYRGPDLFSEALIARLTRLSAGLSRRINVLADKT EEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAAYAAQTHTLTLAHLDAAAGDAELPQTQRTAPRRMTNRRWAWLGVGAVALGLLAWAAW HHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH QARPQPSAAIPAAAAVPEPAVSHAVRVLDEARLTRQWLAAAAPGTHVIQVAAAKDAAQAA CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCEE VLLAGLDPNTPRPVRVFYGRSRGAPAWMILVGEFPDRDAATTALRQLPATTPGVEALRDA EEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHCC PFLRTVRKMRAVALPTG HHHHHHHHHHHHCCCCC >Mature Secondary Structure MYLDYFGLKEAPFRITPNTEYWYAGGQRGEILAALLYAIAHGEGIIKVVGEVGSGKTMLC CCCCCCCCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH RKLAAQLPDDVDSVYLGNPSLDPDDMLAAILADLGETTASGRHARLAQLNAVLLARHEAG HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCC RRVVVFVEEAQGIALDKLEFLRLLTNLETATDKLLQIVLFGQPELDTQLADPRIRQLRDR CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHH ITLSLYLSPLNEGEVGDYLRARLAVAGYRGPDLFSEALIARLTRLSAGLSRRINVLADKT EEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAAYAAQTHTLTLAHLDAAAGDAELPQTQRTAPRRMTNRRWAWLGVGAVALGLLAWAAW HHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH QARPQPSAAIPAAAAVPEPAVSHAVRVLDEARLTRQWLAAAAPGTHVIQVAAAKDAAQAA CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCEE VLLAGLDPNTPRPVRVFYGRSRGAPAWMILVGEFPDRDAATTALRQLPATTPGVEALRDA EEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHCC PFLRTVRKMRAVALPTG HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]