Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316554

Identifier: 74316554

GI number: 74316554

Start: 560616

End: 561188

Strand: Reverse

Name: 74316554

Synonym: Tbd_0536

Alternate gene names: NA

Gene position: 561188-560616 (Counterclockwise)

Preceding gene: 74316555

Following gene: 74316553

Centisome position: 19.29

GC content: 68.59

Gene sequence:

>573_bases
ATGATTTCCCGGGGTTCGCTGTGGCTGCCGCTCGCGATTCTGCTGTTGCTCGCCGCGTTGAGCTTCGCGATCGAGCGCGC
CGTGCAGGTCACGCCTGCGCCCGAACACGCCGCTGAAAGCGATCCGGAGGGCATCATGGAAAACTTCGACGCCTTGCGCA
CCGACGCGACCGGACGTCCGCAATACCGCCTCTCGGCCAAACGGCTCAAGCACTACACCGGCAGCAGGCTCACCGAGCTC
GAGCTGCCGCGCTTCGTGCAGATCGATCCCGAAGCCGGCGAAATCCGCGCCGCGGCGCGCGAAGCGACGATCTCGCCGAC
CGGCGACGAGGTCGACCTGCGCGGCGACGTCAACGTCGTCCGCGCCGCCCACGCGGGGCAGTCGGCCATGACCCTGCGCA
CCGCACGGCTGCTCGTGTTTCCCGAGCAGGACCAGCTGCGGTCGCCGGGGCCCGTCGACATCCGCGACGACCTGCTGACC
GTGCGCGCAGGCGCCATGCACTACGACGCGCGGCTTCGCGTGATCAAACTGAGCGGACGGGTCCACACCCGTTACCTTCC
CCGGAGAAACTAG

Upstream 100 bases:

>100_bases
GCCTGCGAATTCCTGATGCGCGCCCAGGGCACGCTCGACGCGGCGCTCGCCCCCTACCTGCAATGAAGGCCCGCGGGCTG
CGGGCGGCCGGTCCGACGCA

Downstream 100 bases:

>100_bases
CGCCATGCGAACCCCGATCACCCCCCTGTGCGCCGCGCTCTGGCTCGCGCTCCTGGCCGCGCCTGCGCATGCCGAGACCG
CCGACCGCGACAAGCCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRPQYRLSAKRLKHYTGSRLTEL
ELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVVRAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLT
VRAGAMHYDARLRVIKLSGRVHTRYLPRRN

Sequences:

>Translated_190_residues
MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRPQYRLSAKRLKHYTGSRLTEL
ELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVVRAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLT
VRAGAMHYDARLRVIKLSGRVHTRYLPRRN
>Mature_190_residues
MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRPQYRLSAKRLKHYTGSRLTEL
ELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVVRAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLT
VRAGAMHYDARLRVIKLSGRVHTRYLPRRN

Specific function: Unknown

COG id: COG3117

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21080; Mature: 21080

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRP
CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QYRLSAKRLKHYTGSRLTELELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVV
CHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEECCCCEEE
RAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLTVRAGAMHYDARLRVIKLSGR
EEHHCCCCHHEEEEEEEEEECCHHHCCCCCCCCHHHHHEEHHHCCEEECCEEEEEEECCC
VHTRYLPRRN
EEEECCCCCC
>Mature Secondary Structure
MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRP
CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QYRLSAKRLKHYTGSRLTELELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVV
CHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEECCCCEEE
RAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLTVRAGAMHYDARLRVIKLSGR
EEHHCCCCHHEEEEEEEEEECCHHHCCCCCCCCHHHHHEEHHHCCEEECCEEEEEEECCC
VHTRYLPRRN
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA