| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316554
Identifier: 74316554
GI number: 74316554
Start: 560616
End: 561188
Strand: Reverse
Name: 74316554
Synonym: Tbd_0536
Alternate gene names: NA
Gene position: 561188-560616 (Counterclockwise)
Preceding gene: 74316555
Following gene: 74316553
Centisome position: 19.29
GC content: 68.59
Gene sequence:
>573_bases ATGATTTCCCGGGGTTCGCTGTGGCTGCCGCTCGCGATTCTGCTGTTGCTCGCCGCGTTGAGCTTCGCGATCGAGCGCGC CGTGCAGGTCACGCCTGCGCCCGAACACGCCGCTGAAAGCGATCCGGAGGGCATCATGGAAAACTTCGACGCCTTGCGCA CCGACGCGACCGGACGTCCGCAATACCGCCTCTCGGCCAAACGGCTCAAGCACTACACCGGCAGCAGGCTCACCGAGCTC GAGCTGCCGCGCTTCGTGCAGATCGATCCCGAAGCCGGCGAAATCCGCGCCGCGGCGCGCGAAGCGACGATCTCGCCGAC CGGCGACGAGGTCGACCTGCGCGGCGACGTCAACGTCGTCCGCGCCGCCCACGCGGGGCAGTCGGCCATGACCCTGCGCA CCGCACGGCTGCTCGTGTTTCCCGAGCAGGACCAGCTGCGGTCGCCGGGGCCCGTCGACATCCGCGACGACCTGCTGACC GTGCGCGCAGGCGCCATGCACTACGACGCGCGGCTTCGCGTGATCAAACTGAGCGGACGGGTCCACACCCGTTACCTTCC CCGGAGAAACTAG
Upstream 100 bases:
>100_bases GCCTGCGAATTCCTGATGCGCGCCCAGGGCACGCTCGACGCGGCGCTCGCCCCCTACCTGCAATGAAGGCCCGCGGGCTG CGGGCGGCCGGTCCGACGCA
Downstream 100 bases:
>100_bases CGCCATGCGAACCCCGATCACCCCCCTGTGCGCCGCGCTCTGGCTCGCGCTCCTGGCCGCGCCTGCGCATGCCGAGACCG CCGACCGCGACAAGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRPQYRLSAKRLKHYTGSRLTEL ELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVVRAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLT VRAGAMHYDARLRVIKLSGRVHTRYLPRRN
Sequences:
>Translated_190_residues MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRPQYRLSAKRLKHYTGSRLTEL ELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVVRAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLT VRAGAMHYDARLRVIKLSGRVHTRYLPRRN >Mature_190_residues MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRPQYRLSAKRLKHYTGSRLTEL ELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVVRAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLT VRAGAMHYDARLRVIKLSGRVHTRYLPRRN
Specific function: Unknown
COG id: COG3117
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21080; Mature: 21080
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRP CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC QYRLSAKRLKHYTGSRLTELELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVV CHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEECCCCEEE RAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLTVRAGAMHYDARLRVIKLSGR EEHHCCCCHHEEEEEEEEEECCHHHCCCCCCCCHHHHHEEHHHCCEEECCEEEEEEECCC VHTRYLPRRN EEEECCCCCC >Mature Secondary Structure MISRGSLWLPLAILLLLAALSFAIERAVQVTPAPEHAAESDPEGIMENFDALRTDATGRP CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC QYRLSAKRLKHYTGSRLTELELPRFVQIDPEAGEIRAAAREATISPTGDEVDLRGDVNVV CHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCEEECCCCEEE RAAHAGQSAMTLRTARLLVFPEQDQLRSPGPVDIRDDLLTVRAGAMHYDARLRVIKLSGR EEHHCCCCHHEEEEEEEEEECCHHHCCCCCCCCHHHHHEEHHHCCEEECCEEEEEEECCC VHTRYLPRRN EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA