Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yieF [H]

Identifier: 74316526

GI number: 74316526

Start: 534917

End: 535495

Strand: Reverse

Name: yieF [H]

Synonym: Tbd_0508

Alternate gene names: 74316526

Gene position: 535495-534917 (Counterclockwise)

Preceding gene: 74316538

Following gene: 74316521

Centisome position: 18.4

GC content: 67.53

Gene sequence:

>579_bases
ATGCCCAAGATTCTGGCTTTTTCCGGCAGCATCCGCCGCGACTCGTGGAACCGCAAGCTGATCCTGCTCGCCGCCGACGC
CTGCCAGGCGGCCGGCGCCGAAACCACGCTGATCGACCTCGCCGACTACCCGCTGCCGCTCTATAACGGCGACGACGAGG
CGCGCGACGGACTGCCCGACAATGCGCTACGCCTCAAGGCCCTGTTCAAGGCGCACGATGCCTTGCTGATCGCGAGCCCC
GAATACAACAGCTCGGTGCCGCCGCTGTTGAAGAACACGCTCGACTGGGTGTCACGCGAGTGGCAGGGCGAATCGGGCCT
GCTGCCCTACCAGGACAAGGTCGCCGCGATCCTGGCCGCGTCGCCCGGGCAGTACGGCGGCATGCGCATGCTGCCGCACC
TGCGCCAGATCCTGAATACACTCGGCGTCGTGGTCCTGCCCGGGCAGTTCTCGCTGCCGCACGCTGATCGGGCGTTCGAC
GAGGAGAACGGCGCCTTGAAGTCGCCCGGGCGGCTGCACACGGTGGTCATGGAACTGGTCAGCGTCGCGGCCGCACTCGC
CCGGCCGCCGGTTCAATAA

Upstream 100 bases:

>100_bases
GAATCGGCGATTGTGCCGGTTTTGCCCCGGCGCGGCCATCGCCCCGGGGCGCTTTAGACGGGCCTCGCTACAATGCGGTG
TTTGCACTCCAGGACCCGCC

Downstream 100 bases:

>100_bases
GGCGAAAAAAAGCGCCCCGAAGGGCGCTCCCCTATTCGGCCATGTGTGGCAGCTCACTTGTAGACCGTCACGGTCTTCGT
CGTGACGTTGCCCGAGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPKILAFSGSIRRDSWNRKLILLAADACQAAGAETTLIDLADYPLPLYNGDDEARDGLPDNALRLKALFKAHDALLIASP
EYNSSVPPLLKNTLDWVSREWQGESGLLPYQDKVAAILAASPGQYGGMRMLPHLRQILNTLGVVVLPGQFSLPHADRAFD
EENGALKSPGRLHTVVMELVSVAAALARPPVQ

Sequences:

>Translated_192_residues
MPKILAFSGSIRRDSWNRKLILLAADACQAAGAETTLIDLADYPLPLYNGDDEARDGLPDNALRLKALFKAHDALLIASP
EYNSSVPPLLKNTLDWVSREWQGESGLLPYQDKVAAILAASPGQYGGMRMLPHLRQILNTLGVVVLPGQFSLPHADRAFD
EENGALKSPGRLHTVVMELVSVAAALARPPVQ
>Mature_191_residues
PKILAFSGSIRRDSWNRKLILLAADACQAAGAETTLIDLADYPLPLYNGDDEARDGLPDNALRLKALFKAHDALLIASPE
YNSSVPPLLKNTLDWVSREWQGESGLLPYQDKVAAILAASPGQYGGMRMLPHLRQILNTLGVVVLPGQFSLPHADRAFDE
ENGALKSPGRLHTVVMELVSVAAALARPPVQ

Specific function: Unknown

COG id: COG0431

COG function: function code R; Predicted flavoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family [H]

Homologues:

Organism=Escherichia coli, GI1790149, Length=190, Percent_Identity=30, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 20801; Mature: 20670

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKILAFSGSIRRDSWNRKLILLAADACQAAGAETTLIDLADYPLPLYNGDDEARDGLPD
CCCEEECCCCCCCCCCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCCCC
NALRLKALFKAHDALLIASPEYNSSVPPLLKNTLDWVSREWQGESGLLPYQDKVAAILAA
HHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEC
SPGQYGGMRMLPHLRQILNTLGVVVLPGQFSLPHADRAFDEENGALKSPGRLHTVVMELV
CCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SVAAALARPPVQ
HHHHHHHCCCCC
>Mature Secondary Structure 
PKILAFSGSIRRDSWNRKLILLAADACQAAGAETTLIDLADYPLPLYNGDDEARDGLPD
CCEEECCCCCCCCCCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCCCC
NALRLKALFKAHDALLIASPEYNSSVPPLLKNTLDWVSREWQGESGLLPYQDKVAAILAA
HHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEC
SPGQYGGMRMLPHLRQILNTLGVVVLPGQFSLPHADRAFDEENGALKSPGRLHTVVMELV
CCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
SVAAALARPPVQ
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]