| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is glnE [H]
Identifier: 74316521
GI number: 74316521
Start: 525926
End: 528610
Strand: Reverse
Name: glnE [H]
Synonym: Tbd_0503
Alternate gene names: 74316521
Gene position: 528610-525926 (Counterclockwise)
Preceding gene: 74316526
Following gene: 74316518
Centisome position: 18.17
GC content: 70.17
Gene sequence:
>2685_bases ATGAGCAATCCCGCACTGAAACGGCTTGCCCGCTGCTCGCGTTTCGGCCGCCGCCTGCTCGCCGCGCAGCCCGCCCTTGC AGAGGCCCTCGTGCCCATGCTCGAGCGGCCTTTCGGGCGCGATGCGATGGTGGCTTTTCTGAGCGAGCCGCCGTGCGTCG ACGAGGACAGCCTGCACCGGCGCCTGCGCCAGTTGCGTCAGCGCGTCTGGCTCGTCACGACCGCGCGCGACCTCGCTGGC AGCGCCGATCTGGGCGAAGTCGTCGCGACCTGGAGCGCGCTCGCCGAAACGAGCATCGAGACTGGACTCGCGTTCCACCA CACGACGCTCGCCGCGCGCCACGGCGAGCCGCGCGGCGCCGACGGCGCGCCGCAGCGCATGGTCGTCGTCGGCATGGGCA AGCTCGGCGGCGGCGAACTCAACGTCTCGTCCGACATCGACCTGATCTATCTCTATCCCGAGGAAGGCGAGACCGCGGCG GACGGCGACGCCGCGGTGCGCTCGATCAGCAATCACGAATTCTTCGTCCGCCTCGGGCGCAAGCTCACCGCGGCGCTCGG CGAGAACACCGCCGACGGCTACGTCTTCCGCGTCGACCTGCGGCTGCGGCCATGGGGCGAGTCCGGGCCGTTCGCGATGG GTTTCGATATGCTCGAGGACTATCTCGTCGCGCACGGCAGGCCCTGGGAGCGCTACGCCTGGATCAAGGCACGGCCGCTG ACGGGCGGGCATCACGACGCACTCGCCGCGGTCGTGCGACCTTTCGTATTCCGCAAGTACCTCGATTTCGAGGCCTTCGC CGCGATCCGCGAGCTGCACGCGCAGATCCGCCGCGAAGTCGTGCGCCGCGAAATGGCGACCGACGTCAAGCTCGGTCCCG GCGGCATCCGTGAAATCGAGTTCACGGCGCAGGTGTTCCAACTCATACGCGGCGGCCAGATCCGCACGCTGCAGCAGCGG CCGACGCTCACGGTGCTCGGCGAACTCGCGAAAAGCGGGCTGCTCGCGGCCGACGCGCGGCAGGAACTCGCGGCGGCCTA CGACTTTCTGCGCCGCCTCGAACACCGCATCCAGTATCTCGACGACGCGCAGACCCAGCGCCTGCCCGACGATACCGATT CGCAGGCGATGCTTGCCGAGGCGATGGGCGTCGCCGATTACGGCACGCTCGTTGCCGCGCTCGACCGCCACCGCAGCCGC GTGACGCGGCACTTCGAGCAGGCGTTCGCCGCGCCGCAGACCGACCAGATGAGCCATCCGCTCACCGCCGTGTGCTGTGG CACGGCCGGCGTCGAAGCGGCAACGGCCTTGCTGGAGAACGCCGGCTACGACGATGCCGCGCAGGTGCTGGCGACGCTCG AGGCCTTGCGCGAGGCGAGCGCGCGGCTGCCCGAATCGACCCAGTTGCGGCTGAACGCGCTGCTGCCGCCGGCACTCGAA GTCATCGGCAGCCAGCGCGACCCGCAGGCCACGCTCGAGCGTTTCGCGCGGCTGGTGCAATCGATCGCGCGCCGCGCCAC CTACCTCGCCCTGCTCGCCGAATATCCGGCCGCGCTACGCCAGCTCGTACGGCTGCTGGCCGCGAGCCCCTGGGCCGCGC AGCTCATCACGCGGCAACCGCAACTGCTCGACGAGCTGATCGCGCCGCAGTCGCTGCTGGCGCTGCCCGACTGGCCCACG CTCGCCGCGCAGCTGCGCGACGAGCTCGACGCCCAGCCGAACGACACCGAGGCGCAGATGGACGCGTTGCGCCGCTTCAA GCAGGTGCAAACGCTGCGCCTGCTGGCGCAGGACGTCGCCGGGCGCCTGACCCTCGAAGCGCTGTCGGATCACCTGTCGT ATCTGGCCGACACGCTGCTCGCCGAAACACTCGGCCGCTGCTGGGCAGGCCTCAAGTCACGTCACCGCGACGCGCCGCGC TTCGCCGTCGTCGGTTACGGCAAGCTCGGCGGCAAGGAGCTCGGTTACGCGTCCGATCTCGACCTGGTGTTCCTCTACGA CGACGCCGACCCGCGCGCACAGGAAACCTATGCACGGCTCGCGCAGCGCATCAACACCTGGCTCGGCACGCTTACGTCGG CCGGCATCCTCTACGAAACCGACCTCAGGCTGCGCCCTGACGGCGCCTCGGGGCTGCTCGTCAGTTCGATGGCGGCGTTC CGCGATTACCAGTTGCAGCACGCCTGGGTATGGGAGCATCAGGCGCTGACGCGGGCGCGCTTCGTCTGCGGCGACGGCGA AATCGGCGCGCGCTTCGAGACCTTGCGCCGCGAAGTGCTGTGCCTGCCCCGCGACGCGGAGGCGCTGCGCGCCGAGGTCC GCGCGATGCGCGAGAAAATGCACGCGGGTCACGTCAACGCGAGCGAACTGTTCGACCTCAAGCACGACCGCGGCGGCATC GTCGACGTCGAATTCTGCGTGCAATACCTCGTGCTGCGGCACAGCGCGGCGCATCCCGAAATGGCCGACAACGTGGGCAA TATCGCGCTGCTCCTGCGCGCCGGCGCGGCCGGCCTCGTTCCAGCGACGCTCGCGCAGGGCGCGGCCGATGCCTACCGCG AACTGCGGCGCCAGCAGCACGCGATCAAGCTGAGCGGCGCCGAGTACGCGCGGGTTCCTCCGGGCGATCTCGAAGCGGTG CGCGCGGCGGTGTCGGCCCTGCGCGCCGAAGTGCTGGGCGGCTGA
Upstream 100 bases:
>100_bases GGCGGGAATACACGGGTTTCGGTCAGTACCGACTCGATGGCTGCCATACAAGCTCTCCGCTGTTAGAGTGTCCGATAAAG CACAAATTCTAATCCATGCC
Downstream 100 bases:
>100_bases ATGCCTGCGGCGCCCCGCGCGCGCCGCTCAATTTCCGCCGTAGAGCCAGCCCCGGCGCACCAGCCACTTCTCGATCTCGA CGCCGATGAAAACGACCGAC
Product: putative glutamate-ammonia-ligase adenylyltransferase
Products: NA
Alternate protein names: Glutamine-synthetase adenylyltransferase; ATase; [Glutamate--ammonia-ligase] adenylyltransferase [H]
Number of amino acids: Translated: 894; Mature: 893
Protein sequence:
>894_residues MSNPALKRLARCSRFGRRLLAAQPALAEALVPMLERPFGRDAMVAFLSEPPCVDEDSLHRRLRQLRQRVWLVTTARDLAG SADLGEVVATWSALAETSIETGLAFHHTTLAARHGEPRGADGAPQRMVVVGMGKLGGGELNVSSDIDLIYLYPEEGETAA DGDAAVRSISNHEFFVRLGRKLTAALGENTADGYVFRVDLRLRPWGESGPFAMGFDMLEDYLVAHGRPWERYAWIKARPL TGGHHDALAAVVRPFVFRKYLDFEAFAAIRELHAQIRREVVRREMATDVKLGPGGIREIEFTAQVFQLIRGGQIRTLQQR PTLTVLGELAKSGLLAADARQELAAAYDFLRRLEHRIQYLDDAQTQRLPDDTDSQAMLAEAMGVADYGTLVAALDRHRSR VTRHFEQAFAAPQTDQMSHPLTAVCCGTAGVEAATALLENAGYDDAAQVLATLEALREASARLPESTQLRLNALLPPALE VIGSQRDPQATLERFARLVQSIARRATYLALLAEYPAALRQLVRLLAASPWAAQLITRQPQLLDELIAPQSLLALPDWPT LAAQLRDELDAQPNDTEAQMDALRRFKQVQTLRLLAQDVAGRLTLEALSDHLSYLADTLLAETLGRCWAGLKSRHRDAPR FAVVGYGKLGGKELGYASDLDLVFLYDDADPRAQETYARLAQRINTWLGTLTSAGILYETDLRLRPDGASGLLVSSMAAF RDYQLQHAWVWEHQALTRARFVCGDGEIGARFETLRREVLCLPRDAEALRAEVRAMREKMHAGHVNASELFDLKHDRGGI VDVEFCVQYLVLRHSAAHPEMADNVGNIALLLRAGAAGLVPATLAQGAADAYRELRRQQHAIKLSGAEYARVPPGDLEAV RAAVSALRAEVLGG
Sequences:
>Translated_894_residues MSNPALKRLARCSRFGRRLLAAQPALAEALVPMLERPFGRDAMVAFLSEPPCVDEDSLHRRLRQLRQRVWLVTTARDLAG SADLGEVVATWSALAETSIETGLAFHHTTLAARHGEPRGADGAPQRMVVVGMGKLGGGELNVSSDIDLIYLYPEEGETAA DGDAAVRSISNHEFFVRLGRKLTAALGENTADGYVFRVDLRLRPWGESGPFAMGFDMLEDYLVAHGRPWERYAWIKARPL TGGHHDALAAVVRPFVFRKYLDFEAFAAIRELHAQIRREVVRREMATDVKLGPGGIREIEFTAQVFQLIRGGQIRTLQQR PTLTVLGELAKSGLLAADARQELAAAYDFLRRLEHRIQYLDDAQTQRLPDDTDSQAMLAEAMGVADYGTLVAALDRHRSR VTRHFEQAFAAPQTDQMSHPLTAVCCGTAGVEAATALLENAGYDDAAQVLATLEALREASARLPESTQLRLNALLPPALE VIGSQRDPQATLERFARLVQSIARRATYLALLAEYPAALRQLVRLLAASPWAAQLITRQPQLLDELIAPQSLLALPDWPT LAAQLRDELDAQPNDTEAQMDALRRFKQVQTLRLLAQDVAGRLTLEALSDHLSYLADTLLAETLGRCWAGLKSRHRDAPR FAVVGYGKLGGKELGYASDLDLVFLYDDADPRAQETYARLAQRINTWLGTLTSAGILYETDLRLRPDGASGLLVSSMAAF RDYQLQHAWVWEHQALTRARFVCGDGEIGARFETLRREVLCLPRDAEALRAEVRAMREKMHAGHVNASELFDLKHDRGGI VDVEFCVQYLVLRHSAAHPEMADNVGNIALLLRAGAAGLVPATLAQGAADAYRELRRQQHAIKLSGAEYARVPPGDLEAV RAAVSALRAEVLGG >Mature_893_residues SNPALKRLARCSRFGRRLLAAQPALAEALVPMLERPFGRDAMVAFLSEPPCVDEDSLHRRLRQLRQRVWLVTTARDLAGS ADLGEVVATWSALAETSIETGLAFHHTTLAARHGEPRGADGAPQRMVVVGMGKLGGGELNVSSDIDLIYLYPEEGETAAD GDAAVRSISNHEFFVRLGRKLTAALGENTADGYVFRVDLRLRPWGESGPFAMGFDMLEDYLVAHGRPWERYAWIKARPLT GGHHDALAAVVRPFVFRKYLDFEAFAAIRELHAQIRREVVRREMATDVKLGPGGIREIEFTAQVFQLIRGGQIRTLQQRP TLTVLGELAKSGLLAADARQELAAAYDFLRRLEHRIQYLDDAQTQRLPDDTDSQAMLAEAMGVADYGTLVAALDRHRSRV TRHFEQAFAAPQTDQMSHPLTAVCCGTAGVEAATALLENAGYDDAAQVLATLEALREASARLPESTQLRLNALLPPALEV IGSQRDPQATLERFARLVQSIARRATYLALLAEYPAALRQLVRLLAASPWAAQLITRQPQLLDELIAPQSLLALPDWPTL AAQLRDELDAQPNDTEAQMDALRRFKQVQTLRLLAQDVAGRLTLEALSDHLSYLADTLLAETLGRCWAGLKSRHRDAPRF AVVGYGKLGGKELGYASDLDLVFLYDDADPRAQETYARLAQRINTWLGTLTSAGILYETDLRLRPDGASGLLVSSMAAFR DYQLQHAWVWEHQALTRARFVCGDGEIGARFETLRREVLCLPRDAEALRAEVRAMREKMHAGHVNASELFDLKHDRGGIV DVEFCVQYLVLRHSAAHPEMADNVGNIALLLRAGAAGLVPATLAQGAADAYRELRRQQHAIKLSGAEYARVPPGDLEAVR AAVSALRAEVLGG
Specific function: Adenylation and deadenylation of glutamate--ammonia ligase [H]
COG id: COG1391
COG function: function code OT; Glutamine synthetase adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnE family [H]
Homologues:
Organism=Escherichia coli, GI1789433, Length=856, Percent_Identity=42.1728971962617, Blast_Score=579, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023057 - InterPro: IPR005190 - InterPro: IPR013546 [H]
Pfam domain/function: PF08335 GlnD_UR_UTase; PF03710 GlnE [H]
EC number: =2.7.7.42 [H]
Molecular weight: Translated: 98421; Mature: 98290
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPALKRLARCSRFGRRLLAAQPALAEALVPMLERPFGRDAMVAFLSEPPCVDEDSLHR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHH RLRQLRQRVWLVTTARDLAGSADLGEVVATWSALAETSIETGLAFHHTTLAARHGEPRGA HHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC DGAPQRMVVVGMGKLGGGELNVSSDIDLIYLYPEEGETAADGDAAVRSISNHEFFVRLGR CCCCCEEEEEECCCCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHH KLTAALGENTADGYVFRVDLRLRPWGESGPFAMGFDMLEDYLVAHGRPWERYAWIKARPL HHHHHHCCCCCCCEEEEEEEEEECCCCCCCCEECHHHHHHHHHHCCCCHHHEEEEEECCC TGGHHDALAAVVRPFVFRKYLDFEAFAAIRELHAQIRREVVRREMATDVKLGPGGIREIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH FTAQVFQLIRGGQIRTLQQRPTLTVLGELAKSGLLAADARQELAAAYDFLRRLEHRIQYL HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DDAQTQRLPDDTDSQAMLAEAMGVADYGTLVAALDRHRSRVTRHFEQAFAAPQTDQMSHP CCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LTAVCCGTAGVEAATALLENAGYDDAAQVLATLEALREASARLPESTQLRLNALLPPALE HHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHH VIGSQRDPQATLERFARLVQSIARRATYLALLAEYPAALRQLVRLLAASPWAAQLITRQP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH QLLDELIAPQSLLALPDWPTLAAQLRDELDAQPNDTEAQMDALRRFKQVQTLRLLAQDVA HHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRLTLEALSDHLSYLADTLLAETLGRCWAGLKSRHRDAPRFAVVGYGKLGGKELGYASDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC DLVFLYDDADPRAQETYARLAQRINTWLGTLTSAGILYETDLRLRPDGASGLLVSSMAAF CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCCCHHHHHHHHHH RDYQLQHAWVWEHQALTRARFVCGDGEIGARFETLRREVLCLPRDAEALRAEVRAMREKM HHHCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH HAGHVNASELFDLKHDRGGIVDVEFCVQYLVLRHSAAHPEMADNVGNIALLLRAGAAGLV HCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHCCCCEEHHEECCCCCCH PATLAQGAADAYRELRRQQHAIKLSGAEYARVPPGDLEAVRAAVSALRAEVLGG HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNPALKRLARCSRFGRRLLAAQPALAEALVPMLERPFGRDAMVAFLSEPPCVDEDSLHR CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHH RLRQLRQRVWLVTTARDLAGSADLGEVVATWSALAETSIETGLAFHHTTLAARHGEPRGA HHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC DGAPQRMVVVGMGKLGGGELNVSSDIDLIYLYPEEGETAADGDAAVRSISNHEFFVRLGR CCCCCEEEEEECCCCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHH KLTAALGENTADGYVFRVDLRLRPWGESGPFAMGFDMLEDYLVAHGRPWERYAWIKARPL HHHHHHCCCCCCCEEEEEEEEEECCCCCCCCEECHHHHHHHHHHCCCCHHHEEEEEECCC TGGHHDALAAVVRPFVFRKYLDFEAFAAIRELHAQIRREVVRREMATDVKLGPGGIREIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH FTAQVFQLIRGGQIRTLQQRPTLTVLGELAKSGLLAADARQELAAAYDFLRRLEHRIQYL HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DDAQTQRLPDDTDSQAMLAEAMGVADYGTLVAALDRHRSRVTRHFEQAFAAPQTDQMSHP CCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LTAVCCGTAGVEAATALLENAGYDDAAQVLATLEALREASARLPESTQLRLNALLPPALE HHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHH VIGSQRDPQATLERFARLVQSIARRATYLALLAEYPAALRQLVRLLAASPWAAQLITRQP HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH QLLDELIAPQSLLALPDWPTLAAQLRDELDAQPNDTEAQMDALRRFKQVQTLRLLAQDVA HHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRLTLEALSDHLSYLADTLLAETLGRCWAGLKSRHRDAPRFAVVGYGKLGGKELGYASDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC DLVFLYDDADPRAQETYARLAQRINTWLGTLTSAGILYETDLRLRPDGASGLLVSSMAAF CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCCCHHHHHHHHHH RDYQLQHAWVWEHQALTRARFVCGDGEIGARFETLRREVLCLPRDAEALRAEVRAMREKM HHHCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH HAGHVNASELFDLKHDRGGIVDVEFCVQYLVLRHSAAHPEMADNVGNIALLLRAGAAGLV HCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHCCCCEEHHEECCCCCCH PATLAQGAADAYRELRRQQHAIKLSGAEYARVPPGDLEAVRAAVSALRAEVLGG HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA