| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is coaX
Identifier: 74316479
GI number: 74316479
Start: 484682
End: 485416
Strand: Direct
Name: coaX
Synonym: Tbd_0461
Alternate gene names: 74316479
Gene position: 484682-485416 (Clockwise)
Preceding gene: 74316478
Following gene: 74316480
Centisome position: 16.66
GC content: 69.39
Gene sequence:
>735_bases ATGAGCGGATGCCGTATCTTGCTCGACGCCGGTAACTCCAGCCTCAAGTGGGCCGTCGTCGAGGACGGAACATGGCTCGC CCGCGGCCGCAGCGACTACAGTGACCTGTCGGCCGTAGAGGCGGAATTGGACGCGGGGTCGGAATGCTTCATCGCGAGCG TGGCAAGCCGGGTCTACGAGGAGAAGCTGGCGGCCCTGCTGACGGCGGCCGGCTGTTCGGCCGTCTGGCTCAAAAGCGAA GCGGCTTTCGACGACGTGACGAACGACTATCGTGATCCGACACAGCTCGGCGTGGATCGCTGGATGGGTCTGGTCGCGGC GCGCGCGCGCCGACGCGCCCCGACGCTCGTCGTGTCGGCCGGAACGGCGATGACGGTCGACGCCTTGTCCGGCGACGGCA GCTTCCTCGGTGGACTCATCGTGCCGGGGGTGGCGTTGATGCAGCGGTCCCTGCAACAGGGGACGGCGGGCGGCGCAGCC GCCGGTGGCGCGTGGCAGGCGTTTCCCCGTTGTACTGCGGATGCGGCATATAGCGGAATCATCGCCGCGCTATGCGGGGC CGTGGAGGGCCAGCACGTGCGGCTGGCGGCGCATGAGGGCATCTCGCCGGCCTGCCTGATCACCGGCGGCGGGGCCGAGA CACTGCTTCCGCATTTGGGGGTCGACGCCGAGCACGTGCCCACGCTCGTGCTCGAAGGTATCGAGCGCGTCGCGCGCGCA GGGGGGCGAGGATGA
Upstream 100 bases:
>100_bases CCGGCGTCGACGAAACGGGCGCCTTCCTGTTGCAGGCGCCAAACGCGAGCGTGGCGCCCTATAGCGGTGGCGAAATCAGC CTGCGTCTGGACGCGCGCCG
Downstream 100 bases:
>100_bases AACGTCTGGCATGGTCCCTGCTGATCGCGAACGTGCTCGCGGCCGGTTTCTTCCTCGCACGCGATCACTGGCCGACGGCG AGCGCGCCGCACAGTGCACC
Product: putative transcriptional acitvator, Baf
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSGCRILLDAGNSSLKWAVVEDGTWLARGRSDYSDLSAVEAELDAGSECFIASVASRVYEEKLAALLTAAGCSAVWLKSE AAFDDVTNDYRDPTQLGVDRWMGLVAARARRRAPTLVVSAGTAMTVDALSGDGSFLGGLIVPGVALMQRSLQQGTAGGAA AGGAWQAFPRCTADAAYSGIIAALCGAVEGQHVRLAAHEGISPACLITGGGAETLLPHLGVDAEHVPTLVLEGIERVARA GGRG
Sequences:
>Translated_244_residues MSGCRILLDAGNSSLKWAVVEDGTWLARGRSDYSDLSAVEAELDAGSECFIASVASRVYEEKLAALLTAAGCSAVWLKSE AAFDDVTNDYRDPTQLGVDRWMGLVAARARRRAPTLVVSAGTAMTVDALSGDGSFLGGLIVPGVALMQRSLQQGTAGGAA AGGAWQAFPRCTADAAYSGIIAALCGAVEGQHVRLAAHEGISPACLITGGGAETLLPHLGVDAEHVPTLVLEGIERVARA GGRG >Mature_243_residues SGCRILLDAGNSSLKWAVVEDGTWLARGRSDYSDLSAVEAELDAGSECFIASVASRVYEEKLAALLTAAGCSAVWLKSEA AFDDVTNDYRDPTQLGVDRWMGLVAARARRRAPTLVVSAGTAMTVDALSGDGSFLGGLIVPGVALMQRSLQQGTAGGAAA GGAWQAFPRCTADAAYSGIIAALCGAVEGQHVRLAAHEGISPACLITGGGAETLLPHLGVDAEHVPTLVLEGIERVARAG GRG
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_THIDA (Q3SLJ6)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314219.1 - ProteinModelPortal: Q3SLJ6 - SMR: Q3SLJ6 - STRING: Q3SLJ6 - GeneID: 3673094 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_0461 - NMPDR: fig|292415.3.peg.22 - eggNOG: COG1521 - HOGENOM: HBG634537 - OMA: CRIVSVR - BioCyc: TDEN292415:TBD_0461-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 25011; Mature: 24879
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: ACT_SITE 99-99 BINDING 90-90 BINDING 122-122 BINDING 172-172
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGCRILLDAGNSSLKWAVVEDGTWLARGRSDYSDLSAVEAELDAGSECFIASVASRVYE CCCCEEEEECCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EKLAALLTAAGCSAVWLKSEAAFDDVTNDYRDPTQLGVDRWMGLVAARARRRAPTLVVSA HHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEC GTAMTVDALSGDGSFLGGLIVPGVALMQRSLQQGTAGGAAAGGAWQAFPRCTADAAYSGI CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHH IAALCGAVEGQHVRLAAHEGISPACLITGGGAETLLPHLGVDAEHVPTLVLEGIERVARA HHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GGRG CCCC >Mature Secondary Structure SGCRILLDAGNSSLKWAVVEDGTWLARGRSDYSDLSAVEAELDAGSECFIASVASRVYE CCCEEEEECCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EKLAALLTAAGCSAVWLKSEAAFDDVTNDYRDPTQLGVDRWMGLVAARARRRAPTLVVSA HHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEC GTAMTVDALSGDGSFLGGLIVPGVALMQRSLQQGTAGGAAAGGAWQAFPRCTADAAYSGI CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHH IAALCGAVEGQHVRLAAHEGISPACLITGGGAETLLPHLGVDAEHVPTLVLEGIERVARA HHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GGRG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA