Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316480

Identifier: 74316480

GI number: 74316480

Start: 485413

End: 486057

Strand: Direct

Name: 74316480

Synonym: Tbd_0462

Alternate gene names: NA

Gene position: 485413-486057 (Clockwise)

Preceding gene: 74316479

Following gene: 74316483

Centisome position: 16.68

GC content: 68.22

Gene sequence:

>645_bases
ATGAAACGTCTGGCATGGTCCCTGCTGATCGCGAACGTGCTCGCGGCCGGTTTCTTCCTCGCACGCGATCACTGGCCGAC
GGCGAGCGCGCCGCACAGTGCACCTTTCAACGTCGACCGGCTCAGCCTTCGCCGCGGTGACGCACCGGCTGCGACCCCGC
GGCCGAGTGCGCTGCCCGTCGAGGCCTTGTGCATCGAATGGCGGGGACTTGCGGCGGACGAATTCGCCCGGGTGCGCGAA
CAGTTGAAGACGATGGCCGGTGAGCGCGTCATGTCGTTCACCGAGATCCCCCTCGCCACGCGCCAATGGGTGCTTTTCCC
GCCGCTGCCGAGCGCCGAGGCTGCCGCCGCGAAGGCGGATGAACTCGCGGCGGCGGGCGTGCAGGACGTCTTCGTCGTGC
AGGACGGACCGTGGCGTAACGCGATTTCGCTCGGCCTCTACGGCAACGAGGAGGCGACCGCGCGGCGCGTGCGCGAACTC
GAGGGCAAGGGGGTGTTCGGCACGCGGGTCGAACTGCTGCCGCGTCAAGGGACGGATTTCTACTTCGTGGTCCGCAGCGA
CGATCCCGACACGCTGAAAGACCTCGGCGCGATCAGGCAGGCGTATCCCAACAGCCAGCAGTCGCGCATCGCCTGTCCGC
GCTGA

Upstream 100 bases:

>100_bases
GGGCCGAGACACTGCTTCCGCATTTGGGGGTCGACGCCGAGCACGTGCCCACGCTCGTGCTCGAAGGTATCGAGCGCGTC
GCGCGCGCAGGGGGGCGAGG

Downstream 100 bases:

>100_bases
AGCGGGGCTACGGAAAAAGGGAGCCGGAGCGCAGCAGGAAGTGAAGAACGATGCCGCCGAAGACCGCGGCGCCGAACCAG
GTGTTGTGCAGGAACGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKRLAWSLLIANVLAAGFFLARDHWPTASAPHSAPFNVDRLSLRRGDAPAATPRPSALPVEALCIEWRGLAADEFARVRE
QLKTMAGERVMSFTEIPLATRQWVLFPPLPSAEAAAAKADELAAAGVQDVFVVQDGPWRNAISLGLYGNEEATARRVREL
EGKGVFGTRVELLPRQGTDFYFVVRSDDPDTLKDLGAIRQAYPNSQQSRIACPR

Sequences:

>Translated_214_residues
MKRLAWSLLIANVLAAGFFLARDHWPTASAPHSAPFNVDRLSLRRGDAPAATPRPSALPVEALCIEWRGLAADEFARVRE
QLKTMAGERVMSFTEIPLATRQWVLFPPLPSAEAAAAKADELAAAGVQDVFVVQDGPWRNAISLGLYGNEEATARRVREL
EGKGVFGTRVELLPRQGTDFYFVVRSDDPDTLKDLGAIRQAYPNSQQSRIACPR
>Mature_214_residues
MKRLAWSLLIANVLAAGFFLARDHWPTASAPHSAPFNVDRLSLRRGDAPAATPRPSALPVEALCIEWRGLAADEFARVRE
QLKTMAGERVMSFTEIPLATRQWVLFPPLPSAEAAAAKADELAAAGVQDVFVVQDGPWRNAISLGLYGNEEATARRVREL
EGKGVFGTRVELLPRQGTDFYFVVRSDDPDTLKDLGAIRQAYPNSQQSRIACPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23525; Mature: 23525

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLAWSLLIANVLAAGFFLARDHWPTASAPHSAPFNVDRLSLRRGDAPAATPRPSALPV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCH
EALCIEWRGLAADEFARVREQLKTMAGERVMSFTEIPLATRQWVLFPPLPSAEAAAAKAD
HHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHH
ELAAAGVQDVFVVQDGPWRNAISLGLYGNEEATARRVRELEGKGVFGTRVELLPRQGTDF
HHHHCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCE
YFVVRSDDPDTLKDLGAIRQAYPNSQQSRIACPR
EEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLAWSLLIANVLAAGFFLARDHWPTASAPHSAPFNVDRLSLRRGDAPAATPRPSALPV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCH
EALCIEWRGLAADEFARVREQLKTMAGERVMSFTEIPLATRQWVLFPPLPSAEAAAAKAD
HHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHH
ELAAAGVQDVFVVQDGPWRNAISLGLYGNEEATARRVRELEGKGVFGTRVELLPRQGTDF
HHHHCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCE
YFVVRSDDPDTLKDLGAIRQAYPNSQQSRIACPR
EEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA