| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316450
Identifier: 74316450
GI number: 74316450
Start: 451307
End: 452035
Strand: Direct
Name: 74316450
Synonym: Tbd_0432
Alternate gene names: NA
Gene position: 451307-452035 (Clockwise)
Preceding gene: 74316449
Following gene: 74316455
Centisome position: 15.51
GC content: 68.72
Gene sequence:
>729_bases GTGATCGTTCTCTTCACCGATTTTGGCAGCCGGGACCCTTACGTCGGGCAGCTCAAGGCGCGTCTCGTCGAGCGTGCACC CGGGCATCCGGTCCTCGATCTGCTGCACGAGGTACCTGACTTCAACGCTCACGCCGGGGCGCATCTGCTGGCTGCGCTCG CCCCGAACTTTCCGTCCGGAAGCGTCTTTCTGGCCGTCGTCGATCCCGGTGTTGGCACGCCGCGCGGCGCGGTCGTCGTC CAGGCGGGCGGGCGCTGGTTCGTCGGGCCGGACAATGGCTTGACGTCGGTCGTCGCGGCGCGTCAGGCCGACACAAGGGT GTGGCGTATCGTCTGGCGGCCCGAAGCGCTGGCGCCGACTTTCCACGGGCGTGATCTGTTCGCGCCAATCGCAGCCGACA TCGCCCGCGGCGAATTCCCCGCCTCGAAACTGGAGGAAGTCGACGCGCTTGCGGTCGAGTTCGACGCCGGCGATCTTGCG CGCGTCGTCTATATCGACCACTACGGCAACGCCTGGACCGGGCTGCGTTCCGTCCCGAGCGACGCGCGGGTATCGGCCGC GGGCGGCGTTTTCCGACACGGCGCAAGCTTCGGCGACGTCGCGAAAGGCGAGGGGCTGTGGCTAATGAACAGCGTCGGCC TGCTCGAACTCGCGGTCAACCGCGGAAGCGCCGCGGCCGTCTACGGCCTCGAGGTCGGCGACCCGGTGCGCGTGCAGCGG CCGAACTGA
Upstream 100 bases:
>100_bases CCGGCTTTTTTTACGCGCAGATGCGGGGGTCTCGGGCCGGGGAGGTTGCCGCCCGCGCGCCGTCTCGGCATAGTCGTGGC TTTCATCGCGGGAGTCGAGC
Downstream 100 bases:
>100_bases CCGAGGCGAGACTCTGACCAGGGCAAACGTTCGCCGTCGTCCTGGCTGGGCGGAGAGGCGGCCGGACTCAGCGCGGCTAG ACCCCGAGCAGCACCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSGSVFLAVVDPGVGTPRGAVVV QAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPTFHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLA RVVYIDHYGNAWTGLRSVPSDARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR PN
Sequences:
>Translated_242_residues MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSGSVFLAVVDPGVGTPRGAVVV QAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPTFHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLA RVVYIDHYGNAWTGLRSVPSDARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR PN >Mature_242_residues MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSGSVFLAVVDPGVGTPRGAVVV QAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPTFHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLA RVVYIDHYGNAWTGLRSVPSDARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR PN
Specific function: Unknown
COG id: COG1912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002747 - InterPro: IPR023227 - InterPro: IPR023228 [H]
Pfam domain/function: PF01887 DUF62 [H]
EC number: NA
Molecular weight: Translated: 25618; Mature: 25618
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSG CEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC SVFLAVVDPGVGTPRGAVVVQAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPT CEEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC FHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLARVVYIDHYGNAWTGLRSVPS CCCCCHHHHHHHHHHCCCCCHHHHHHCEEEEEEECCCCEEEEEEEECCCCCHHHHHCCCC DARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR CCEEECCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEECCCCEEEEC PN CC >Mature Secondary Structure MIVLFTDFGSRDPYVGQLKARLVERAPGHPVLDLLHEVPDFNAHAGAHLLAALAPNFPSG CEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC SVFLAVVDPGVGTPRGAVVVQAGGRWFVGPDNGLTSVVAARQADTRVWRIVWRPEALAPT CEEEEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCC FHGRDLFAPIAADIARGEFPASKLEEVDALAVEFDAGDLARVVYIDHYGNAWTGLRSVPS CCCCCHHHHHHHHHHCCCCCHHHHHHCEEEEEEECCCCEEEEEEEECCCCCHHHHHCCCC DARVSAAGGVFRHGASFGDVAKGEGLWLMNSVGLLELAVNRGSAAAVYGLEVGDPVRVQR CCEEECCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEECCCCEEEEC PN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]