| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316385
Identifier: 74316385
GI number: 74316385
Start: 396249
End: 398171
Strand: Direct
Name: 74316385
Synonym: Tbd_0367
Alternate gene names: NA
Gene position: 396249-398171 (Clockwise)
Preceding gene: 74316383
Following gene: 74316386
Centisome position: 13.62
GC content: 65.16
Gene sequence:
>1923_bases ATGTCAGAAAAAACCCGGATTCTCGATTCGCTGAACGAACAGGCTCTGCTGCTGCCGAGCTTGGTCAACCGCGCCCTCGC CGCGAACGACCGCGTCAAGTACCGTTTCACCCTGCTGCAGGCTGCGCAGGCGCATGCCGAGCGGCCGGATGCGGTGATAT CGAGCCTGCGCGCCGAGCGTCTGGCCGCCGGGGTGCCCGATGGTAATCTGGACCGCGTGGTTGGCGACTCGGAACGGCTT GGGAAGGGGCGCTACCGCGTCCCGGAAGCCGCCCGCATCGTTCGTGATGCATTCTCCGATGTCACTGAAATGCTGGAGCC CCTGCGCGTGGCCGAGAGCGGAGACAGTGCGGCATTCACCCAGCGCCTGCAGGCTTTCACTGTCCAGGATTTCGCCGGCG ATGAACTGGCGGCCGATCAGATCCATGCCATCACCTCCGGAGACCGCGCGGCCGGAGACAGCCTCCACCTGCTGGTGATG GACATGCACCGGGCGTTGAATGCGCTGCAGGCGAGCCTCGCCAGCGAAACCATCAGCGGTTGCCGTGCCTACGGCATCCG CGACACCGACCGGGCGCTGATCGCAGCGTTCATGGAAGGCATCAATCGCACTGCGCCGCTCAAGTTCGACCATCCGGGCC TGCCTGCCACGGCGACCCGAGTAGGTGACAAGCTGGTCCTGCAGAACGACATCGGCACCACCGATGCGCATGTGCTGGTG ATCCACGTCACGGGCCGGACTGTCACTGTCACCTACACCGACGTCCATTTGCCGCGCTTGCTGTTCTTCCAGAGTCTTTT CGACGGCTATCCGGTCAAATGGGAGGACACGCGCTCGCGCAAGGACGCGGGGATGGAGGACGGCGTCTACCACCTCTGCG TAGGGAGCCACACTGCGCGCAACAATACCCAGCTACGCGACTACCTCGGCCATCTCGGTTCGCGGCTGGTATTCCTCATC GACTGGAACCGGGCGCGCAAGCGGCTGCGCCTGTTCGTTCCGCGCAAGGCGGCGACAGACGTGCTCAAGTGGGCGGCCGA CGGCAACATAGGCCACATGGCCTGGCTCAAGGCCGGCGGCGAGCAGTTAATCTTCGACGCCATGAGTTTTGCGTACGGTG GCCAACTGAAACCGGGAGACCGGCTTGACGATCTGCTGACGGAAAGCCGCGCAGAGCAGTTTCTGCGCTTCAACCTGAAG CAGGCGCTCGAAGGGATGGCCCAGGGCCGGCCGGCTTCGCTGGCCGCGGACGAGATCCGCACCGAGCTGGCGTCGCAGGT ACGTTCCACCGAGGATGCCATGCTAGACACAGCACTGGAACATGCCGGCCTGATCGTCGAACTGGCTGACACCGTGCGCG CCGCACTGGAAGCGGCACAGGCCGGGCGGCAGCACGAGGTCGCCGCGATGGCTGAGCGCGCCAAGGACTGGGAAACCGCG GCCGACCGCGAGCTGAACAATGCACGCAGCACCCTACTGGAGGGCGACAGCTTCGTGCTGCAGTTGATGAGCGAAGCCGA CGACATCGCCGACGATCTCGAGGAAGCGGTGTTCCACATCACGCTCTCGCCCACCGCGCCGGGCACGTCGATTTCTGCTC TGGGCAAGCTGGTGGATCCGGTCGCCAATGCCAGCCGCGAACTGGTCAAGGCGCTGGCCGCTTCGCGCCATGCCCGCCGC GGCGTACCCCGCGAGGACATGGACGATTTTTTGCAGGCGGTCCACGCCATCCGCACCATGGAGCATGCGAGCGACCTGGC CGAGCGCGACGTGAAGCGCACCCTGGCAGGCGACCCGCGTCCATTCTCGGAGGTGTTCGGCATCGTCGAGGCAGCGCGCA ATCTCGAGGAGGCAGCCGACGGCCTCATGCACGTGGCCCTGCTGCTGCGCGATCATGTGATGGGCAAGGTGATTCATGCC TAA
Upstream 100 bases:
>100_bases TCGGGGTTCAATCGACGGCAAGCGTCTTTATTGCGTGCGGCATCCACGCGTCCGAGAGGGAGTACCAAATCTTTAATGTG ACAATCCTATCCTTATTAAT
Downstream 100 bases:
>100_bases AGGAAAAAGCAAGTCCGCCGCACGGCTGCCCGTGTTCGACCTGAACGGTCGAGACGGCGTGCCGGACGTGCGCATCGTCG GCTTCAAGGCACACAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MSEKTRILDSLNEQALLLPSLVNRALAANDRVKYRFTLLQAAQAHAERPDAVISSLRAERLAAGVPDGNLDRVVGDSERL GKGRYRVPEAARIVRDAFSDVTEMLEPLRVAESGDSAAFTQRLQAFTVQDFAGDELAADQIHAITSGDRAAGDSLHLLVM DMHRALNALQASLASETISGCRAYGIRDTDRALIAAFMEGINRTAPLKFDHPGLPATATRVGDKLVLQNDIGTTDAHVLV IHVTGRTVTVTYTDVHLPRLLFFQSLFDGYPVKWEDTRSRKDAGMEDGVYHLCVGSHTARNNTQLRDYLGHLGSRLVFLI DWNRARKRLRLFVPRKAATDVLKWAADGNIGHMAWLKAGGEQLIFDAMSFAYGGQLKPGDRLDDLLTESRAEQFLRFNLK QALEGMAQGRPASLAADEIRTELASQVRSTEDAMLDTALEHAGLIVELADTVRAALEAAQAGRQHEVAAMAERAKDWETA ADRELNNARSTLLEGDSFVLQLMSEADDIADDLEEAVFHITLSPTAPGTSISALGKLVDPVANASRELVKALAASRHARR GVPREDMDDFLQAVHAIRTMEHASDLAERDVKRTLAGDPRPFSEVFGIVEAARNLEEAADGLMHVALLLRDHVMGKVIHA
Sequences:
>Translated_640_residues MSEKTRILDSLNEQALLLPSLVNRALAANDRVKYRFTLLQAAQAHAERPDAVISSLRAERLAAGVPDGNLDRVVGDSERL GKGRYRVPEAARIVRDAFSDVTEMLEPLRVAESGDSAAFTQRLQAFTVQDFAGDELAADQIHAITSGDRAAGDSLHLLVM DMHRALNALQASLASETISGCRAYGIRDTDRALIAAFMEGINRTAPLKFDHPGLPATATRVGDKLVLQNDIGTTDAHVLV IHVTGRTVTVTYTDVHLPRLLFFQSLFDGYPVKWEDTRSRKDAGMEDGVYHLCVGSHTARNNTQLRDYLGHLGSRLVFLI DWNRARKRLRLFVPRKAATDVLKWAADGNIGHMAWLKAGGEQLIFDAMSFAYGGQLKPGDRLDDLLTESRAEQFLRFNLK QALEGMAQGRPASLAADEIRTELASQVRSTEDAMLDTALEHAGLIVELADTVRAALEAAQAGRQHEVAAMAERAKDWETA ADRELNNARSTLLEGDSFVLQLMSEADDIADDLEEAVFHITLSPTAPGTSISALGKLVDPVANASRELVKALAASRHARR GVPREDMDDFLQAVHAIRTMEHASDLAERDVKRTLAGDPRPFSEVFGIVEAARNLEEAADGLMHVALLLRDHVMGKVIHA >Mature_639_residues SEKTRILDSLNEQALLLPSLVNRALAANDRVKYRFTLLQAAQAHAERPDAVISSLRAERLAAGVPDGNLDRVVGDSERLG KGRYRVPEAARIVRDAFSDVTEMLEPLRVAESGDSAAFTQRLQAFTVQDFAGDELAADQIHAITSGDRAAGDSLHLLVMD MHRALNALQASLASETISGCRAYGIRDTDRALIAAFMEGINRTAPLKFDHPGLPATATRVGDKLVLQNDIGTTDAHVLVI HVTGRTVTVTYTDVHLPRLLFFQSLFDGYPVKWEDTRSRKDAGMEDGVYHLCVGSHTARNNTQLRDYLGHLGSRLVFLID WNRARKRLRLFVPRKAATDVLKWAADGNIGHMAWLKAGGEQLIFDAMSFAYGGQLKPGDRLDDLLTESRAEQFLRFNLKQ ALEGMAQGRPASLAADEIRTELASQVRSTEDAMLDTALEHAGLIVELADTVRAALEAAQAGRQHEVAAMAERAKDWETAA DRELNNARSTLLEGDSFVLQLMSEADDIADDLEEAVFHITLSPTAPGTSISALGKLVDPVANASRELVKALAASRHARRG VPREDMDDFLQAVHAIRTMEHASDLAERDVKRTLAGDPRPFSEVFGIVEAARNLEEAADGLMHVALLLRDHVMGKVIHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70052; Mature: 69921
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKTRILDSLNEQALLLPSLVNRALAANDRVKYRFTLLQAAQAHAERPDAVISSLRAER CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAAGVPDGNLDRVVGDSERLGKGRYRVPEAARIVRDAFSDVTEMLEPLRVAESGDSAAFT HHCCCCCCCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QRLQAFTVQDFAGDELAADQIHAITSGDRAAGDSLHLLVMDMHRALNALQASLASETISG HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRAYGIRDTDRALIAAFMEGINRTAPLKFDHPGLPATATRVGDKLVLQNDIGTTDAHVLV HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEE IHVTGRTVTVTYTDVHLPRLLFFQSLFDGYPVKWEDTRSRKDAGMEDGVYHLCVGSHTAR EEEECCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCC NNTQLRDYLGHLGSRLVFLIDWNRARKRLRLFVPRKAATDVLKWAADGNIGHMAWLKAGG CCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCC EQLIFDAMSFAYGGQLKPGDRLDDLLTESRAEQFLRFNLKQALEGMAQGRPASLAADEIR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH TELASQVRSTEDAMLDTALEHAGLIVELADTVRAALEAAQAGRQHEVAAMAERAKDWETA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADRELNNARSTLLEGDSFVLQLMSEADDIADDLEEAVFHITLSPTAPGTSISALGKLVDP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH VANASRELVKALAASRHARRGVPREDMDDFLQAVHAIRTMEHASDLAERDVKRTLAGDPR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PFSEVFGIVEAARNLEEAADGLMHVALLLRDHVMGKVIHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEKTRILDSLNEQALLLPSLVNRALAANDRVKYRFTLLQAAQAHAERPDAVISSLRAER CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAAGVPDGNLDRVVGDSERLGKGRYRVPEAARIVRDAFSDVTEMLEPLRVAESGDSAAFT HHCCCCCCCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QRLQAFTVQDFAGDELAADQIHAITSGDRAAGDSLHLLVMDMHRALNALQASLASETISG HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CRAYGIRDTDRALIAAFMEGINRTAPLKFDHPGLPATATRVGDKLVLQNDIGTTDAHVLV HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEE IHVTGRTVTVTYTDVHLPRLLFFQSLFDGYPVKWEDTRSRKDAGMEDGVYHLCVGSHTAR EEEECCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCC NNTQLRDYLGHLGSRLVFLIDWNRARKRLRLFVPRKAATDVLKWAADGNIGHMAWLKAGG CCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCC EQLIFDAMSFAYGGQLKPGDRLDDLLTESRAEQFLRFNLKQALEGMAQGRPASLAADEIR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH TELASQVRSTEDAMLDTALEHAGLIVELADTVRAALEAAQAGRQHEVAAMAERAKDWETA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADRELNNARSTLLEGDSFVLQLMSEADDIADDLEEAVFHITLSPTAPGTSISALGKLVDP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH VANASRELVKALAASRHARRGVPREDMDDFLQAVHAIRTMEHASDLAERDVKRTLAGDPR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PFSEVFGIVEAARNLEEAADGLMHVALLLRDHVMGKVIHA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA