| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316383
Identifier: 74316383
GI number: 74316383
Start: 395122
End: 395433
Strand: Direct
Name: 74316383
Synonym: Tbd_0365
Alternate gene names: NA
Gene position: 395122-395433 (Clockwise)
Preceding gene: 74316380
Following gene: 74316385
Centisome position: 13.58
GC content: 56.73
Gene sequence:
>312_bases ATGGGTCGAAAAGGCGAATTTGAGGCCGGAGCACTATCTGTTCCCTGGTCGCCTGGGGCGAAATCGCCTCATGTTTCGAC CCGCCAGTACGCCCGCATCGTGCATCGGTGGGTTGCCGCCATTGGACTAGATTCGACGGTCTATGGCACGCACACCATGC GGCGAACCAAGGCGACACTGATTTGCAAGCGAACCAAGAACCTGAGGGCCATCCCGCTCTTGCTCGGTCATACCAAGCTG GAGAGTACTGTTCGATACCTTGGGATCGAGGTCGATGACGCTCTGGAGATCTCGGAGCAAACTGAGATCTAA
Upstream 100 bases:
>100_bases ACGGCAACCAGGTATTGCCCCGAGCGATGGTGGTGCAGCGAAAGACCCAACGTCCAGTGCAGTTCGAACTCACCGAACCG ACAAGGTCTGCCGTGTCGGC
Downstream 100 bases:
>100_bases CAGTGCAATGTAAGCCGCACGCTACGCTCCTTGATGGGCGCCGTGCGGCCTTTTTTGAGCAATGTGCCAAATGCGTGCGG TCGGTCAGGAACGGTCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase; Phage Integrase Family Site Specific Recombinase; Phage Integrase/Recombinase; DNA Integration/Recombination/Inversion Protein; Fragmented Site-Specific Recombinase XerC/XerD; Phage Integrase Protein; Tyrosine Recombinase XerD
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATLICKRTKNLRAIPLLLGHTKL ESTVRYLGIEVDDALEISEQTEI
Sequences:
>Translated_103_residues MGRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATLICKRTKNLRAIPLLLGHTKL ESTVRYLGIEVDDALEISEQTEI >Mature_102_residues GRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATLICKRTKNLRAIPLLLGHTKLE STVRYLGIEVDDALEISEQTEI
Specific function: Unknown
COG id: COG0582
COG function: function code L; Integrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11458; Mature: 11327
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATL CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ICKRTKNLRAIPLLLGHTKLESTVRYLGIEVDDALEISEQTEI EEECCCCCEEEEHEECCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATL CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ICKRTKNLRAIPLLLGHTKLESTVRYLGIEVDDALEISEQTEI EEECCCCCEEEEHEECCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA