Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316383

Identifier: 74316383

GI number: 74316383

Start: 395122

End: 395433

Strand: Direct

Name: 74316383

Synonym: Tbd_0365

Alternate gene names: NA

Gene position: 395122-395433 (Clockwise)

Preceding gene: 74316380

Following gene: 74316385

Centisome position: 13.58

GC content: 56.73

Gene sequence:

>312_bases
ATGGGTCGAAAAGGCGAATTTGAGGCCGGAGCACTATCTGTTCCCTGGTCGCCTGGGGCGAAATCGCCTCATGTTTCGAC
CCGCCAGTACGCCCGCATCGTGCATCGGTGGGTTGCCGCCATTGGACTAGATTCGACGGTCTATGGCACGCACACCATGC
GGCGAACCAAGGCGACACTGATTTGCAAGCGAACCAAGAACCTGAGGGCCATCCCGCTCTTGCTCGGTCATACCAAGCTG
GAGAGTACTGTTCGATACCTTGGGATCGAGGTCGATGACGCTCTGGAGATCTCGGAGCAAACTGAGATCTAA

Upstream 100 bases:

>100_bases
ACGGCAACCAGGTATTGCCCCGAGCGATGGTGGTGCAGCGAAAGACCCAACGTCCAGTGCAGTTCGAACTCACCGAACCG
ACAAGGTCTGCCGTGTCGGC

Downstream 100 bases:

>100_bases
CAGTGCAATGTAAGCCGCACGCTACGCTCCTTGATGGGCGCCGTGCGGCCTTTTTTGAGCAATGTGCCAAATGCGTGCGG
TCGGTCAGGAACGGTCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase; Phage Integrase Family Site Specific Recombinase; Phage Integrase/Recombinase; DNA Integration/Recombination/Inversion Protein; Fragmented Site-Specific Recombinase XerC/XerD; Phage Integrase Protein; Tyrosine Recombinase XerD

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATLICKRTKNLRAIPLLLGHTKL
ESTVRYLGIEVDDALEISEQTEI

Sequences:

>Translated_103_residues
MGRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATLICKRTKNLRAIPLLLGHTKL
ESTVRYLGIEVDDALEISEQTEI
>Mature_102_residues
GRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATLICKRTKNLRAIPLLLGHTKLE
STVRYLGIEVDDALEISEQTEI

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11458; Mature: 11327

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATL
CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ICKRTKNLRAIPLLLGHTKLESTVRYLGIEVDDALEISEQTEI
EEECCCCCEEEEHEECCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRKGEFEAGALSVPWSPGAKSPHVSTRQYARIVHRWVAAIGLDSTVYGTHTMRRTKATL
CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ICKRTKNLRAIPLLLGHTKLESTVRYLGIEVDDALEISEQTEI
EEECCCCCEEEEHEECCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA