| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316342
Identifier: 74316342
GI number: 74316342
Start: 347525
End: 348010
Strand: Direct
Name: 74316342
Synonym: Tbd_0324
Alternate gene names: NA
Gene position: 347525-348010 (Clockwise)
Preceding gene: 74316341
Following gene: 74316343
Centisome position: 11.94
GC content: 66.46
Gene sequence:
>486_bases ATGAAACAGGTGGATCCGGAAGACTGTGTAGGCGAGGCGGCGGGCGCCTTCGTGTTTCGATCGCGTCCCAACTGTTCGCT GACCTCGGCCCAGGAACAGCTCGCCCTGTGGAGCCTCGCGGCCCCGTGCGGTGCGGCGGCGATCGCCTTTGCCCTCGCGG GCTACTGGATCATCCTGCTCTACGCGGGATTGCAAGTGGGCGTGCTCGCATGGGCGTTCAGAGCGCTGCGCGAGCGCAAG GACGATTACGAGCGCCTGACGATCGACGGCGACAGGGTCGTGCTGGAATGGCGCAGCCGCAAACGCGAAGGCCGGCGCGA GCTGAATCGGCAGTGGACGCGGGTGCGCTGCACCTGCGCGGCCCCCGGGCGGAATTGCCGTGTTGGCGTCTGCTGTTACG GGCGCGAAACATTGGTCGGACAGTATCTGAGTGACGAAGCCCGGCTCCGGCTGGCCGCGACGTTACGCAGCAAGTTGCAG GCATAG
Upstream 100 bases:
>100_bases TAAATCAACGACTTAAATCGTATTTGAGACTTGTTCGCGGTCGCGGCACCGTGTTACTGTTCGCGACAAAATGCCGCACC CGGCTTCCCAGGTACCTGAC
Downstream 100 bases:
>100_bases GTTGGCAACGGCGCCCGCAACGACTACCCATAACAATGTGAAGAGGATGGGGACGCGATGAAAAGCACGTGGCGATGGAC AAGCGGGACCGCTGTGGGGC
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKQVDPEDCVGEAAGAFVFRSRPNCSLTSAQEQLALWSLAAPCGAAAIAFALAGYWIILLYAGLQVGVLAWAFRALRERK DDYERLTIDGDRVVLEWRSRKREGRRELNRQWTRVRCTCAAPGRNCRVGVCCYGRETLVGQYLSDEARLRLAATLRSKLQ A
Sequences:
>Translated_161_residues MKQVDPEDCVGEAAGAFVFRSRPNCSLTSAQEQLALWSLAAPCGAAAIAFALAGYWIILLYAGLQVGVLAWAFRALRERK DDYERLTIDGDRVVLEWRSRKREGRRELNRQWTRVRCTCAAPGRNCRVGVCCYGRETLVGQYLSDEARLRLAATLRSKLQ A >Mature_161_residues MKQVDPEDCVGEAAGAFVFRSRPNCSLTSAQEQLALWSLAAPCGAAAIAFALAGYWIILLYAGLQVGVLAWAFRALRERK DDYERLTIDGDRVVLEWRSRKREGRRELNRQWTRVRCTCAAPGRNCRVGVCCYGRETLVGQYLSDEARLRLAATLRSKLQ A
Specific function: Unknown
COG id: COG5488
COG function: function code S; Integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18056; Mature: 18056
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVDPEDCVGEAAGAFVFRSRPNCSLTSAQEQLALWSLAAPCGAAAIAFALAGYWIILL CCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH YAGLQVGVLAWAFRALRERKDDYERLTIDGDRVVLEWRSRKREGRRELNRQWTRVRCTCA HHHHHHHHHHHHHHHHHHCCCCHHEEEECCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEC APGRNCRVGVCCYGRETLVGQYLSDEARLRLAATLRSKLQA CCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQVDPEDCVGEAAGAFVFRSRPNCSLTSAQEQLALWSLAAPCGAAAIAFALAGYWIILL CCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH YAGLQVGVLAWAFRALRERKDDYERLTIDGDRVVLEWRSRKREGRRELNRQWTRVRCTCA HHHHHHHHHHHHHHHHHHCCCCHHEEEECCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEC APGRNCRVGVCCYGRETLVGQYLSDEARLRLAATLRSKLQA CCCCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA