| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316331
Identifier: 74316331
GI number: 74316331
Start: 337041
End: 338069
Strand: Reverse
Name: 74316331
Synonym: Tbd_0313
Alternate gene names: NA
Gene position: 338069-337041 (Counterclockwise)
Preceding gene: 74316332
Following gene: 74316330
Centisome position: 11.62
GC content: 68.03
Gene sequence:
>1029_bases ATGGCGGAAAGCACACGCACGCCCCAAACAGCCGCACCGCCATCGGTCGCGATCGTACTGCTCAACTGGAACCGCTGGGC CTACACGCTGACCTGCCTCGAAAGCCTATTCCGCCTCGACTACCCGAGCTACTCGGTCATCGTCTGCGACAACGCGTCGT CCGACGACTCGGTGTCGAGGCTGCGCGCGTGGGCCGGGGGCCGACAGAGCGCACCGCCACCGTCGGCAGCGGAACTGCAT CCGCTCGTCGACCCACCCGTGACCAAGCCGGTCGAGCTGTGCGAAGCGCAGCGCGATGAAACGCCGAGCCGGACCCGCCC GCCCGCCCCGCTCATCCTGATCCAGACCGGCGCCAACCTCGGCTTCGCGGGGGGCTGCAACGTGGGCATCCGCCACGCGC TTGCACAGGGGGCCGACTATGTCTGGATTCTGAACAACGACACGGTCGTGGCCGCGGACAGCCTGCGGCAACTGGTGGCG GTGCAGCAATCCGATCCGGACATCGGCATCGTCGGCTCGACGCTCCTGAGCATCCACCGCCCGACGAAGGTGCTCGCGCT CGGCGGCGGGCGTCTGCGACGCGCGACCGGCGCGACGCGACATATAGGCGCGGGAAGGGACTGGCCCCTGCAACCTCCCG ACCCACGGCCCGAGCCGATGGACTACGTGATCGGCGCGTCCATGCTCGTGAGCCGCCACGTTCTTGAAACGGTGGGGCTC ATGGACGAGGGCTACTTTCTGTATTACGAGGAGCTCGACTGGGCCTTCCGCCTGCCGCCGGAGACGCGGCTCGGCTACGC GCCGGCGAGCGTGATCTATCACCATGAAGGCGGCACGACCGGCGGGATCGTGCGCCGCCATTACTATCGCAGTCTGATCC GTTTTACCTGGCGCCACAACCGGCGCTGGCTGCCGCTCGTCCTGGCCCGCATGGCCTTGCGCGTTCCGGAAGCACTGCTT GCGCGCAACTGGAGCGAGTTCGACGCCCTGCTCTCCCTGTTGCGCCCCGCTCAGATCACGCGCCGATGA
Upstream 100 bases:
>100_bases ATCGATCGATCGCGTGAAGCGCTGGCGAAGGTCTACTCGCGCGAGGCGTTCATGCGGCAGGCCGCCGGCCTGCTCGAAAC CGGGATGACGAGCTAGGACC
Downstream 100 bases:
>100_bases ATACGCCGCCCCCACCCGCGGACTATTTTTCTCACGCCCGCCCCGAGATGCTGCGCTTCGTGCCGACGGATCGCAGCCGC GTGCTCGAACTCGGCTGCGC
Product: rhamnosyl transferase-like protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Rhamnosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Rhamnosyltransferase; Rhamnosyl Transferase Related Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Capsule-Related Glycosyltransferase; Group 2 Family Glycosyltransferase; Glycoside Transferase Family 2 Protein; Glycosyltransferase Family Protein
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAESTRTPQTAAPPSVAIVLLNWNRWAYTLTCLESLFRLDYPSYSVIVCDNASSDDSVSRLRAWAGGRQSAPPPSAAELH PLVDPPVTKPVELCEAQRDETPSRTRPPAPLILIQTGANLGFAGGCNVGIRHALAQGADYVWILNNDTVVAADSLRQLVA VQQSDPDIGIVGSTLLSIHRPTKVLALGGGRLRRATGATRHIGAGRDWPLQPPDPRPEPMDYVIGASMLVSRHVLETVGL MDEGYFLYYEELDWAFRLPPETRLGYAPASVIYHHEGGTTGGIVRRHYYRSLIRFTWRHNRRWLPLVLARMALRVPEALL ARNWSEFDALLSLLRPAQITRR
Sequences:
>Translated_342_residues MAESTRTPQTAAPPSVAIVLLNWNRWAYTLTCLESLFRLDYPSYSVIVCDNASSDDSVSRLRAWAGGRQSAPPPSAAELH PLVDPPVTKPVELCEAQRDETPSRTRPPAPLILIQTGANLGFAGGCNVGIRHALAQGADYVWILNNDTVVAADSLRQLVA VQQSDPDIGIVGSTLLSIHRPTKVLALGGGRLRRATGATRHIGAGRDWPLQPPDPRPEPMDYVIGASMLVSRHVLETVGL MDEGYFLYYEELDWAFRLPPETRLGYAPASVIYHHEGGTTGGIVRRHYYRSLIRFTWRHNRRWLPLVLARMALRVPEALL ARNWSEFDALLSLLRPAQITRR >Mature_341_residues AESTRTPQTAAPPSVAIVLLNWNRWAYTLTCLESLFRLDYPSYSVIVCDNASSDDSVSRLRAWAGGRQSAPPPSAAELHP LVDPPVTKPVELCEAQRDETPSRTRPPAPLILIQTGANLGFAGGCNVGIRHALAQGADYVWILNNDTVVAADSLRQLVAV QQSDPDIGIVGSTLLSIHRPTKVLALGGGRLRRATGATRHIGAGRDWPLQPPDPRPEPMDYVIGASMLVSRHVLETVGLM DEGYFLYYEELDWAFRLPPETRLGYAPASVIYHHEGGTTGGIVRRHYYRSLIRFTWRHNRRWLPLVLARMALRVPEALLA RNWSEFDALLSLLRPAQITRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37934; Mature: 37803
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESTRTPQTAAPPSVAIVLLNWNRWAYTLTCLESLFRLDYPSYSVIVCDNASSDDSVSR CCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH LRAWAGGRQSAPPPSAAELHPLVDPPVTKPVELCEAQRDETPSRTRPPAPLILIQTGANL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC GFAGGCNVGIRHALAQGADYVWILNNDTVVAADSLRQLVAVQQSDPDIGIVGSTLLSIHR CCCCCCCHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEHHHHHHHHCC PTKVLALGGGRLRRATGATRHIGAGRDWPLQPPDPRPEPMDYVIGASMLVSRHVLETVGL CCEEEEECCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC MDEGYFLYYEELDWAFRLPPETRLGYAPASVIYHHEGGTTGGIVRRHYYRSLIRFTWRHN CCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC RRWLPLVLARMALRVPEALLARNWSEFDALLSLLRPAQITRR CCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure AESTRTPQTAAPPSVAIVLLNWNRWAYTLTCLESLFRLDYPSYSVIVCDNASSDDSVSR CCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH LRAWAGGRQSAPPPSAAELHPLVDPPVTKPVELCEAQRDETPSRTRPPAPLILIQTGANL HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC GFAGGCNVGIRHALAQGADYVWILNNDTVVAADSLRQLVAVQQSDPDIGIVGSTLLSIHR CCCCCCCHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEHHHHHHHHCC PTKVLALGGGRLRRATGATRHIGAGRDWPLQPPDPRPEPMDYVIGASMLVSRHVLETVGL CCEEEEECCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC MDEGYFLYYEELDWAFRLPPETRLGYAPASVIYHHEGGTTGGIVRRHYYRSLIRFTWRHN CCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC RRWLPLVLARMALRVPEALLARNWSEFDALLSLLRPAQITRR CCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA