| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316332
Identifier: 74316332
GI number: 74316332
Start: 338074
End: 339183
Strand: Reverse
Name: 74316332
Synonym: Tbd_0314
Alternate gene names: NA
Gene position: 339183-338074 (Counterclockwise)
Preceding gene: 74316335
Following gene: 74316331
Centisome position: 11.66
GC content: 69.28
Gene sequence:
>1110_bases ATGCCCGACCGCATCCTGCTGGTTTCGCCCGCGTCGCCGTTCTCTCCCCAGTCGGGCGCGCAGCAGCGCACGGCCCTGCT GCACGCGGCCTTGCAGCAGCTCTCCGACGTCGACGTCCTGCTGCTCGAGCCGACTGCCGGCCCGAGCCGTCTAGTCGCCC CGGCGCCCGGTGTCCTCGCGCACGGCCTGTGGCAGCAGCGCCCGCTCGGCATCGGAAAATTCTCCCCTGACATGGCCCTG GATCGCGCGCTGAAGAAAAACGGCCTGGACGTCAGGGACTATCGCGTGATCGTCAGCCGTTACCTCAACCCGCTCAGCAA GCTCGTCGTGCCAAAAGGTGTGCGGACCGTCGTCGACCTCGACGACTGGGGCTATCACTACAGTGGCCGCAGGCTCGCGC TCGGGCCGCGCCTCAAGTCGCGCTACGCGGCCTGGCTCGGGCGGCGCCAGCTCGGACGCTTCGACGCTTTCTTCTTCGTC AGCCCGCGCGACCAGGCGCAGCATCCCGAACTGCGTTCGGCCGTCCTCCCGAACATCCCCTACACGCCGCCGGCAGAGCC TTTTCCGCAGGCCGCGAGTAGGACGCTGCTCTTCGTCGGCGCGCTCTGGTACGGCCCCAATCGCGACGGCGTCGATCGCT TTCTCCAGTACATATGGCCAGCAATCAAAGCCGCCGAACCCGAGGCGCGCCTGCTGCTCGCCGGCGCCGCCCCCCCGGCT GCGCGACGGCTATGGGAGGGCCATCCCGACGTGTTCGCGCCGGGTTACGTCGACGACCTGAACGCGGCCTACCGCGACGC GGCCTTCACGGTCGCGCCGATCTACGCCGGTGGCGGCACCAACATCAAGGTCGTCGAATCGCTGGCCTACGGCCGCGCCT GCGTCACCACGCCGCATTGCGCGAACGCCTTCGCGGGCGATCTGATCGACGGCCTCGACGTCGCGTCGGACGACGGCGCC TTCGCACGTCACTGCGTCCGGCTGCTCGGCGACGCACGACTGCGGCAGGCGAGAATCGATCGATCGCGTGAAGCGCTGGC GAAGGTCTACTCGCGCGAGGCGTTCATGCGGCAGGCCGCCGGCCTGCTCGAAACCGGGATGACGAGCTAG
Upstream 100 bases:
>100_bases CCGGCCAGTATCGGTCGCCGCGCACACCGACGAAATGGGCGTTATGATCTCGCCACTTTCGCCGAATACTCGTTGCCCGG CCCCGGGGCCGGCCACGCCC
Downstream 100 bases:
>100_bases GACCATGGCGGAAAGCACACGCACGCCCCAAACAGCCGCACCGCCATCGGTCGCGATCGTACTGCTCAACTGGAACCGCT GGGCCTACACGCTGACCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MPDRILLVSPASPFSPQSGAQQRTALLHAALQQLSDVDVLLLEPTAGPSRLVAPAPGVLAHGLWQQRPLGIGKFSPDMAL DRALKKNGLDVRDYRVIVSRYLNPLSKLVVPKGVRTVVDLDDWGYHYSGRRLALGPRLKSRYAAWLGRRQLGRFDAFFFV SPRDQAQHPELRSAVLPNIPYTPPAEPFPQAASRTLLFVGALWYGPNRDGVDRFLQYIWPAIKAAEPEARLLLAGAAPPA ARRLWEGHPDVFAPGYVDDLNAAYRDAAFTVAPIYAGGGTNIKVVESLAYGRACVTTPHCANAFAGDLIDGLDVASDDGA FARHCVRLLGDARLRQARIDRSREALAKVYSREAFMRQAAGLLETGMTS
Sequences:
>Translated_369_residues MPDRILLVSPASPFSPQSGAQQRTALLHAALQQLSDVDVLLLEPTAGPSRLVAPAPGVLAHGLWQQRPLGIGKFSPDMAL DRALKKNGLDVRDYRVIVSRYLNPLSKLVVPKGVRTVVDLDDWGYHYSGRRLALGPRLKSRYAAWLGRRQLGRFDAFFFV SPRDQAQHPELRSAVLPNIPYTPPAEPFPQAASRTLLFVGALWYGPNRDGVDRFLQYIWPAIKAAEPEARLLLAGAAPPA ARRLWEGHPDVFAPGYVDDLNAAYRDAAFTVAPIYAGGGTNIKVVESLAYGRACVTTPHCANAFAGDLIDGLDVASDDGA FARHCVRLLGDARLRQARIDRSREALAKVYSREAFMRQAAGLLETGMTS >Mature_368_residues PDRILLVSPASPFSPQSGAQQRTALLHAALQQLSDVDVLLLEPTAGPSRLVAPAPGVLAHGLWQQRPLGIGKFSPDMALD RALKKNGLDVRDYRVIVSRYLNPLSKLVVPKGVRTVVDLDDWGYHYSGRRLALGPRLKSRYAAWLGRRQLGRFDAFFFVS PRDQAQHPELRSAVLPNIPYTPPAEPFPQAASRTLLFVGALWYGPNRDGVDRFLQYIWPAIKAAEPEARLLLAGAAPPAA RRLWEGHPDVFAPGYVDDLNAAYRDAAFTVAPIYAGGGTNIKVVESLAYGRACVTTPHCANAFAGDLIDGLDVASDDGAF ARHCVRLLGDARLRQARIDRSREALAKVYSREAFMRQAAGLLETGMTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40325; Mature: 40193
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRILLVSPASPFSPQSGAQQRTALLHAALQQLSDVDVLLLEPTAGPSRLVAPAPGVLA CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHH HGLWQQRPLGIGKFSPDMALDRALKKNGLDVRDYRVIVSRYLNPLSKLVVPKGVRTVVDL HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC DDWGYHYSGRRLALGPRLKSRYAAWLGRRQLGRFDAFFFVSPRDQAQHPELRSAVLPNIP CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCC YTPPAEPFPQAASRTLLFVGALWYGPNRDGVDRFLQYIWPAIKAAEPEARLLLAGAAPPA CCCCCCCCHHHHHHHEEEEEHHEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH ARRLWEGHPDVFAPGYVDDLNAAYRDAAFTVAPIYAGGGTNIKVVESLAYGRACVTTPHC HHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCEEECCCCH ANAFAGDLIDGLDVASDDGAFARHCVRLLGDARLRQARIDRSREALAKVYSREAFMRQAA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLETGMTS HHHHCCCCC >Mature Secondary Structure PDRILLVSPASPFSPQSGAQQRTALLHAALQQLSDVDVLLLEPTAGPSRLVAPAPGVLA CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHH HGLWQQRPLGIGKFSPDMALDRALKKNGLDVRDYRVIVSRYLNPLSKLVVPKGVRTVVDL HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC DDWGYHYSGRRLALGPRLKSRYAAWLGRRQLGRFDAFFFVSPRDQAQHPELRSAVLPNIP CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCC YTPPAEPFPQAASRTLLFVGALWYGPNRDGVDRFLQYIWPAIKAAEPEARLLLAGAAPPA CCCCCCCCHHHHHHHEEEEEHHEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH ARRLWEGHPDVFAPGYVDDLNAAYRDAAFTVAPIYAGGGTNIKVVESLAYGRACVTTPHC HHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCEEECCCCH ANAFAGDLIDGLDVASDDGAFARHCVRLLGDARLRQARIDRSREALAKVYSREAFMRQAA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLETGMTS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA