Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316330

Identifier: 74316330

GI number: 74316330

Start: 336394

End: 337044

Strand: Reverse

Name: 74316330

Synonym: Tbd_0312

Alternate gene names: NA

Gene position: 337044-336394 (Counterclockwise)

Preceding gene: 74316331

Following gene: 74316329

Centisome position: 11.58

GC content: 68.66

Gene sequence:

>651_bases
ATGAATACGCCGCCCCCACCCGCGGACTATTTTTCTCACGCCCGCCCCGAGATGCTGCGCTTCGTGCCGACGGATCGCAG
CCGCGTGCTCGAACTCGGCTGCGCCTCGGGCGCCTTCGGCGGCGCGCTCAAGCACCGTCAGCCGGCCGAGGTGTGGGGGG
TCGAGCCCGACGCCGAGGCGGCCCGCAGCGCGGCTGCGCGTCTCGACCGCGTGTTTCACGGCAGGCTCGAGGCGCGGCTC
GACGAACTGCCGACCCGCCACTTCGACTGTGTCGTCTGCAACGACGTGCTCGAACACCTCGACGACCCCGACGCCACCTT
GCGCGCACTGACCCGCGTGATGGCGCCGAACGCGGTGCTGGTCGGCTCGGTCCCCAACGTCCGCTATTTCCCGGTACTGC
TCGATCTGCTCTGGAACGCGGACTGGCGCTACGCCGAAGACGGCGTGCTCGACCGCACCCATAGGCGCTTCTTCACGCAC
AAGAGCTTTGCGCGCACGCTGGCGGAAGCGGGCTACGCGCCGCAGCAGATCGTCGGCATCAATCCGACCGCCTCGATCAA
GGCCCGGCTCGCGTGCATGCTGAGCCTCGGCAAACTCGACGACTGCCGCTATCTGCAGTTCGCCTTCGTCGCGACGGTTC
GACCGGCATGA

Upstream 100 bases:

>100_bases
CCCGCATGGCCTTGCGCGTTCCGGAAGCACTGCTTGCGCGCAACTGGAGCGAGTTCGACGCCCTGCTCTCCCTGTTGCGC
CCCGCTCAGATCACGCGCCG

Downstream 100 bases:

>100_bases
GCTTTGCTAAAGTCGCCAAGCCCTGCATTGCGGCGCGTGTCGCCGCGCATCGAGACATGAGAACAATAATCGACGTATTC
GACCCCGGAACCGCGAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; O-Antigen Biosynthesis Protein; Glycosyltransferase; SAM-Dependent O-Methyltransferase; Methionine Biosynthesis Protein MetW; Methyltransferase; SAM-Dependent Methyltransferase; Bifunctional SAM-Dependent Methyltransferase Type; Methyltransferase Family Protein; Glycosyl Transferase; Methylase

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNTPPPPADYFSHARPEMLRFVPTDRSRVLELGCASGAFGGALKHRQPAEVWGVEPDAEAARSAAARLDRVFHGRLEARL
DELPTRHFDCVVCNDVLEHLDDPDATLRALTRVMAPNAVLVGSVPNVRYFPVLLDLLWNADWRYAEDGVLDRTHRRFFTH
KSFARTLAEAGYAPQQIVGINPTASIKARLACMLSLGKLDDCRYLQFAFVATVRPA

Sequences:

>Translated_216_residues
MNTPPPPADYFSHARPEMLRFVPTDRSRVLELGCASGAFGGALKHRQPAEVWGVEPDAEAARSAAARLDRVFHGRLEARL
DELPTRHFDCVVCNDVLEHLDDPDATLRALTRVMAPNAVLVGSVPNVRYFPVLLDLLWNADWRYAEDGVLDRTHRRFFTH
KSFARTLAEAGYAPQQIVGINPTASIKARLACMLSLGKLDDCRYLQFAFVATVRPA
>Mature_216_residues
MNTPPPPADYFSHARPEMLRFVPTDRSRVLELGCASGAFGGALKHRQPAEVWGVEPDAEAARSAAARLDRVFHGRLEARL
DELPTRHFDCVVCNDVLEHLDDPDATLRALTRVMAPNAVLVGSVPNVRYFPVLLDLLWNADWRYAEDGVLDRTHRRFFTH
KSFARTLAEAGYAPQQIVGINPTASIKARLACMLSLGKLDDCRYLQFAFVATVRPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24081; Mature: 24081

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPPPPADYFSHARPEMLRFVPTDRSRVLELGCASGAFGGALKHRQPAEVWGVEPDAEA
CCCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCHHCCCCCHHHCCCCCCHHH
ARSAAARLDRVFHGRLEARLDELPTRHFDCVVCNDVLEHLDDPDATLRALTRVMAPNAVL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE
VGSVPNVRYFPVLLDLLWNADWRYAEDGVLDRTHRRFFTHKSFARTLAEAGYAPQQIVGI
EECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
NPTASIKARLACMLSLGKLDDCRYLQFAFVATVRPA
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTPPPPADYFSHARPEMLRFVPTDRSRVLELGCASGAFGGALKHRQPAEVWGVEPDAEA
CCCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCHHCCCCCHHHCCCCCCHHH
ARSAAARLDRVFHGRLEARLDELPTRHFDCVVCNDVLEHLDDPDATLRALTRVMAPNAVL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEE
VGSVPNVRYFPVLLDLLWNADWRYAEDGVLDRTHRRFFTHKSFARTLAEAGYAPQQIVGI
EECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
NPTASIKARLACMLSLGKLDDCRYLQFAFVATVRPA
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA