Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yqiC [C]

Identifier: 74316256

GI number: 74316256

Start: 262217

End: 262480

Strand: Reverse

Name: yqiC [C]

Synonym: Tbd_0238

Alternate gene names: 74316256

Gene position: 262480-262217 (Counterclockwise)

Preceding gene: 74316260

Following gene: 74316255

Centisome position: 9.02

GC content: 64.02

Gene sequence:

>264_bases
ATGAACCCGAAATTTCCCGATTCCCCTTTCCTCAACGACCTGCTGGCCCGGCTCGGCGAGGTGTTGCGCCAGTCCCCGGC
GCAAGACTTCGAGCGAAATCTCAAGGCCGGGGTGACGTCGATGCTGACCAAACTCGATCTGGTGAGCCGCGAGGAGTTCG
ACGTGCAGGCCGCGGTGCTCGCGCGCACGCGCGAAAAGCTGGGCCAACTCGAGGCCCGGTTGGCCGATCTGGAAAAACAC
GAGCGGCAGGCGGACGAAGGCTGA

Upstream 100 bases:

>100_bases
GTGCATCTGCAAAATGCCCTGCACCGTGCCTGTGCCATTGCCCGCTGCACGCGGCGCGCGACGTCGCTTGCTACACTCGC
GCATCACACGGAGGTGGCCG

Downstream 100 bases:

>100_bases
AGCCGTGGGCGTCGCCGTCGTCAAGAGCCGCGCGCTCGCCGGCATGAACGCGCCGGAGGTTGTCGTCGAGGCGCACCTCG
CCAACGGCCTGCCCGCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVLARTREKLGQLEARLADLEKH
ERQADEG

Sequences:

>Translated_87_residues
MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVLARTREKLGQLEARLADLEKH
ERQADEG
>Mature_87_residues
MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVLARTREKLGQLEARLADLEKH
ERQADEG

Specific function: Unknown

COG id: COG2960

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082201, Length=52, Percent_Identity=55.7692307692308, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9835; Mature: 9835

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVL
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTREKLGQLEARLADLEKHERQADEG
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNPKFPDSPFLNDLLARLGEVLRQSPAQDFERNLKAGVTSMLTKLDLVSREEFDVQAAVL
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTREKLGQLEARLADLEKHERQADEG
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA