| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316148
Identifier: 74316148
GI number: 74316148
Start: 139607
End: 140038
Strand: Reverse
Name: 74316148
Synonym: Tbd_0130
Alternate gene names: NA
Gene position: 140038-139607 (Counterclockwise)
Preceding gene: 74316153
Following gene: 74316147
Centisome position: 4.81
GC content: 72.22
Gene sequence:
>432_bases ATGAGCGCATCCCGTCTCGCCGAGCTGCTCGCGACCCAGCTGCCGAACAGCCTCGCGACGCGCGCGCGCGCCCTGCTGCG GACGCAGGACGCGCTCGATCGTGCCCTCCCCTCGGCGCTGAGCGGACACGTGCGCGTCATGCAACTGGAAAACGGGACGC TCAGTGTCGCCTGCGAGAGCGGCGCGGTCGCTACCCGCCTGCGCCAGCAGACGCCCGCGGTTCTCGCCGCGCTGGGCAAG CACGGCGTCGACGCCTGCGCGATACGCCCGAGCGTCGACCCCGGGTTGCGCGAGCGCTATGCCCCGCCCCACGAGAAACC TGGCATGCCGTCGAAAGCACTCGACGGCCTCGCGCACCTCAACGCGGAGATCGAGGAGGGCCCGCTCAAGGAAGCCCTCG ACCGCCTGCTTCGCCACCACCGCGGCCGCTGA
Upstream 100 bases:
>100_bases GACGCGGAAAACCGCTGAATCTTAACATAGCGTCCCGAGGCCTCTCCGGCGCTGCGAAACGCGCCGCGGCCGCCTCGCGG CCTCTCGCTGCGCGCGCTCG
Downstream 100 bases:
>100_bases TCCCGTTCGGAATTGCCTATATTGCGATAGGCGAGGCGGACGCGGCGCGAAAAGTCGGCGATTCAAACCCACGCCAGGCG GCCTCCCGGTCGCGGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSASRLAELLATQLPNSLATRARALLRTQDALDRALPSALSGHVRVMQLENGTLSVACESGAVATRLRQQTPAVLAALGK HGVDACAIRPSVDPGLRERYAPPHEKPGMPSKALDGLAHLNAEIEEGPLKEALDRLLRHHRGR
Sequences:
>Translated_143_residues MSASRLAELLATQLPNSLATRARALLRTQDALDRALPSALSGHVRVMQLENGTLSVACESGAVATRLRQQTPAVLAALGK HGVDACAIRPSVDPGLRERYAPPHEKPGMPSKALDGLAHLNAEIEEGPLKEALDRLLRHHRGR >Mature_142_residues SASRLAELLATQLPNSLATRARALLRTQDALDRALPSALSGHVRVMQLENGTLSVACESGAVATRLRQQTPAVLAALGKH GVDACAIRPSVDPGLRERYAPPHEKPGMPSKALDGLAHLNAEIEEGPLKEALDRLLRHHRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15314; Mature: 15183
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASRLAELLATQLPNSLATRARALLRTQDALDRALPSALSGHVRVMQLENGTLSVACES CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECC GAVATRLRQQTPAVLAALGKHGVDACAIRPSVDPGLRERYAPPHEKPGMPSKALDGLAHL CHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH NAEIEEGPLKEALDRLLRHHRGR CCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SASRLAELLATQLPNSLATRARALLRTQDALDRALPSALSGHVRVMQLENGTLSVACES CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECC GAVATRLRQQTPAVLAALGKHGVDACAIRPSVDPGLRERYAPPHEKPGMPSKALDGLAHL CHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH NAEIEEGPLKEALDRLLRHHRGR CCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA