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The map label for this gene is cc4 [H]

Identifier: 74316147

GI number: 74316147

Start: 138744

End: 139385

Strand: Reverse

Name: cc4 [H]

Synonym: Tbd_0129

Alternate gene names: 74316147

Gene position: 139385-138744 (Counterclockwise)

Preceding gene: 74316148

Following gene: 74316146

Centisome position: 4.79

GC content: 68.69

Gene sequence:

>642_bases
ATGCGACCACACGCAGGTCCCACCCTGGCAGGCGCCCTGATACTGGCGGCTTCCGCCGCGACTGCAGCGCCGCCCGCCAT
CGTCACGCAGGGCAAGGGGGCAGCCACGGCGTGTGCCACGTGCCACGGGGCAGACGGCCTTGGCAACGCCCAGGCCGGAT
TCCCGATGCTCGCGCAATTGCCGCCCGCCTACCTCGCCAAGCAGATCGCCGACTTCAAGGCCGGCACCCGCAGCAACCCG
GTCATGTCGCCGATCGCGGCGGCGCTGACGCCCGAGGACATCGAAGCGAGCGCCCGCTATTACGCGAGTCTGCCACGTCC
CGCCGCGCACGACACGGGCGCTGACCCGGCGACGGTCGATCGCGGCAGAAAACTCGCGATCGACGGCGCCTGGGACCGTA
ACGTACCGCCGTGCTTCAAGTGCCATGCGGTGGATGGCGGCGGCGTCCCGCCGAACTTTCCGCCGATTGCCGGGCAGCAC
GCAAGCTATACCGTAAGCCAGCTCCAGGCCTGGAAATCGGGTGCGCGCAGCAACGACCCGCAAAAGCTCATGAAGACGGT
CGCGCAGAATCTCAGCGACGAAGACATCCGCGCCGTTGCCGCCTACCTGGCGACGCTCGGCAACCGGGGGGCCAAGAAAT
GA

Upstream 100 bases:

>100_bases
CGCCGATTCAGAATCCCTACGGCAAAGACGGCAGGGGGACGGCATGATGCGCGCCGCGGTTTCGACCACCTGATTCTGAT
TCGACTTTTTGGAGCACCCT

Downstream 100 bases:

>100_bases
AGCGCCATACAGCCTTGTTCTGCACGCTCGCCCTGGCCGGCTTCATCAGCGGCTGCGAGCAGGAAAAGTCGCCGCCCAAG
CCCGAGACGGCACCGGCCGA

Product: cytochrome c-type protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRPHAGPTLAGALILAASAATAAPPAIVTQGKGAATACATCHGADGLGNAQAGFPMLAQLPPAYLAKQIADFKAGTRSNP
VMSPIAAALTPEDIEASARYYASLPRPAAHDTGADPATVDRGRKLAIDGAWDRNVPPCFKCHAVDGGGVPPNFPPIAGQH
ASYTVSQLQAWKSGARSNDPQKLMKTVAQNLSDEDIRAVAAYLATLGNRGAKK

Sequences:

>Translated_213_residues
MRPHAGPTLAGALILAASAATAAPPAIVTQGKGAATACATCHGADGLGNAQAGFPMLAQLPPAYLAKQIADFKAGTRSNP
VMSPIAAALTPEDIEASARYYASLPRPAAHDTGADPATVDRGRKLAIDGAWDRNVPPCFKCHAVDGGGVPPNFPPIAGQH
ASYTVSQLQAWKSGARSNDPQKLMKTVAQNLSDEDIRAVAAYLATLGNRGAKK
>Mature_213_residues
MRPHAGPTLAGALILAASAATAAPPAIVTQGKGAATACATCHGADGLGNAQAGFPMLAQLPPAYLAKQIADFKAGTRSNP
VMSPIAAALTPEDIEASARYYASLPRPAAHDTGADPATVDRGRKLAIDGAWDRNVPPCFKCHAVDGGGVPPNFPPIAGQH
ASYTVSQLQAWKSGARSNDPQKLMKTVAQNLSDEDIRAVAAYLATLGNRGAKK

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21786; Mature: 21786

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPHAGPTLAGALILAASAATAAPPAIVTQGKGAATACATCHGADGLGNAQAGFPMLAQL
CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHC
PPAYLAKQIADFKAGTRSNPVMSPIAAALTPEDIEASARYYASLPRPAAHDTGADPATVD
CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHC
RGRKLAIDGAWDRNVPPCFKCHAVDGGGVPPNFPPIAGQHASYTVSQLQAWKSGARSNDP
CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
QKLMKTVAQNLSDEDIRAVAAYLATLGNRGAKK
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRPHAGPTLAGALILAASAATAAPPAIVTQGKGAATACATCHGADGLGNAQAGFPMLAQL
CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHC
PPAYLAKQIADFKAGTRSNPVMSPIAAALTPEDIEASARYYASLPRPAAHDTGADPATVD
CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHC
RGRKLAIDGAWDRNVPPCFKCHAVDGGGVPPNFPPIAGQHASYTVSQLQAWKSGARSNDP
CCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
QKLMKTVAQNLSDEDIRAVAAYLATLGNRGAKK
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]