| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316066
Identifier: 74316066
GI number: 74316066
Start: 49133
End: 50467
Strand: Reverse
Name: 74316066
Synonym: Tbd_0048
Alternate gene names: NA
Gene position: 50467-49133 (Counterclockwise)
Preceding gene: 74316067
Following gene: 74316065
Centisome position: 1.73
GC content: 71.16
Gene sequence:
>1335_bases ATGAAACCGAAAATCATCGTGCTCGACGACGACCCGACCGGCTCGCAGACCGTGCATTCGTGTCTGCTGCTGACGCGCTG GGACGTCGCCACGCTGAAGACGGCGCTGGCCGACGCGGCGCCCTTGTTCTTCGTCCTGACCAACACCCGCGGCATGGACG CGGCGCGCGCCGCAGCGGTGACGCGCGAGGTGTGCGTCAACCTGAAGGCGGCGCTGGTCGACTACACGGGCCCGGTCCTC TTCGTGTCGCGCTCGGATTCGACGCTGCGCGGACACTACCCGGTCGAGACCGACGTCATGAACGAATTGCTCGGACCGTT CGACGCGACGCTGCTCACGCCCGGGTTCTTCGAGGGCGGGCGCATCACACGTGACAGCACGCATTACCTGGTCGTCGACG GCCAGCCAGTGCCGACGCACGAAACCGAATTCGCGCGCGATTCGGTGTTCGGCTACACGACGGCCTTCCTCCCTGACTAC GTGAGCGAGAAGACCGGCGGCCGGGTCGCGGCAGAGTCCGTCGCCCGCCTGACGTTCAAGGATCTGCGCGCAGGCCGCGC AGGCGCGTGGCTCGCCGGCCTCGAAGGCAACGTGGTCGGCGCGGTCGACGGCGAAACGCCGGAGGACTATGCGCTCTTCG CCGACGCCGCGCTCAAGGCCGCCGCGCACGGCAAGCGCCTGTTGTTTCGCAGCGCCGCGTCCCTGCTCACCGCGCTGGCG AAACTGCCGCCGCAGCCGGTCGCCGCCGAATCCTTCGCGAGCCTCGTTCGCGACGGCCGCGCGGGCGCGGTAATCGTCGG CTCCCACGTCGCGAGGGCGACGGCGCAGCTCGGCGCCCTGCTGCGCGAGCGCGGCGTCGTCGGCCTGCCGCTCGACGTCG CGCGGCTGCCCGAAGACCACGACGCGCTCGTCGATGCGCTGCGTGCCGGCGTCGCCCACGCGCACGCACATGGCCTCACG CCGGTCGTCTACACGAGCCGGGGGGAACGCCAGTTCGCGAGCACCGCCGAGCGGCTCGCCTTCGGCGCCGCGGTCTCGGC CGCCCTGATGGCTGTCGTGCGCCAACTTCCGGCGACGCTGGGCTTTCTCGTCAGCAAGGGCGGCATCACCTCGAACGACG TGCTCTCGACCGGCCTCGAACTCGCCGCGGCACGCGTGCTCGGGCAGATCCTGCCCGGCGTCACGGTGGTGCAGACGCCG CCGTGGCATGCGGTCCCGCAACTTCCCGTCGTCATCTTTCCGGGCAACGTCGGCGGCGACGACGCCCTGGCGGAGGTCTA CCGCCGCCTCGCCCCCTCGCGCGCGCAGGCGGGCCGGGCTAAACTCGCTGCCTGA
Upstream 100 bases:
>100_bases TGTTCGACTTCAACGGCATGAACGCGCAGGCGATGGGCGAGCGCGCGATGGCCCTGCTCGAGCGCGCCGCGGGCTGATGC CGGTGTCGGGAGGTCCGTCC
Downstream 100 bases:
>100_bases CTTTATGCTCAGTCCCAGCTTCCTCGCGCATCTGCGCACTCTCCTGCCGGCGCACTGCGTGCTCAACGAGCGCGAAGACC TGCGGCCCTTCGAGTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAVTREVCVNLKAALVDYTGPVL FVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGGRITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDY VSEKTGGRVAAESVARLTFKDLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDHDALVDALRAGVAHAHAHGLT PVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATLGFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTP PWHAVPQLPVVIFPGNVGGDDALAEVYRRLAPSRAQAGRAKLAA
Sequences:
>Translated_444_residues MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAVTREVCVNLKAALVDYTGPVL FVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGGRITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDY VSEKTGGRVAAESVARLTFKDLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDHDALVDALRAGVAHAHAHGLT PVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATLGFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTP PWHAVPQLPVVIFPGNVGGDDALAEVYRRLAPSRAQAGRAKLAA >Mature_444_residues MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAVTREVCVNLKAALVDYTGPVL FVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGGRITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDY VSEKTGGRVAAESVARLTFKDLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDHDALVDALRAGVAHAHAHGLT PVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATLGFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTP PWHAVPQLPVVIFPGNVGGDDALAEVYRRLAPSRAQAGRAKLAA
Specific function: Unknown
COG id: COG3395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46583; Mature: 46583
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAV CCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH TREVCVNLKAALVDYTGPVLFVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGG HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCHHHCCCCCCCCC RITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDYVSEKTGGRVAAESVARLTFK EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA HHHCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDH HCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH DALVDALRAGVAHAHAHGLTPVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATL HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTPPWHAVPQLPVVIFPGNVGGD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCH DALAEVYRRLAPSRAQAGRAKLAA HHHHHHHHHHCCCHHHCCCHHCCC >Mature Secondary Structure MKPKIIVLDDDPTGSQTVHSCLLLTRWDVATLKTALADAAPLFFVLTNTRGMDAARAAAV CCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH TREVCVNLKAALVDYTGPVLFVSRSDSTLRGHYPVETDVMNELLGPFDATLLTPGFFEGG HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCHHHCCCCCCCCC RITRDSTHYLVVDGQPVPTHETEFARDSVFGYTTAFLPDYVSEKTGGRVAAESVARLTFK EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DLRAGRAGAWLAGLEGNVVGAVDGETPEDYALFADAALKAAAHGKRLLFRSAASLLTALA HHHCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KLPPQPVAAESFASLVRDGRAGAVIVGSHVARATAQLGALLRERGVVGLPLDVARLPEDH HCCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH DALVDALRAGVAHAHAHGLTPVVYTSRGERQFASTAERLAFGAAVSAALMAVVRQLPATL HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFLVSKGGITSNDVLSTGLELAAARVLGQILPGVTVVQTPPWHAVPQLPVVIFPGNVGGD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCCCCH DALAEVYRRLAPSRAQAGRAKLAA HHHHHHHHHHCCCHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA