Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316026

Identifier: 74316026

GI number: 74316026

Start: 7358

End: 8500

Strand: Reverse

Name: 74316026

Synonym: Tbd_0008

Alternate gene names: NA

Gene position: 8500-7358 (Counterclockwise)

Preceding gene: 74316027

Following gene: 74316025

Centisome position: 0.29

GC content: 65.79

Gene sequence:

>1143_bases
ATGCGCTTCACCCTTTTGCCGCTCGTGCTGGTTTCCGCGCTCGCGCAGGCCGAGCCGCTGACCCTCGGCGTCGTGCTCGA
TCAGAACGAATCGATCAGCGACACGCAGACCAATCAACGCTATCGCGCCTTCGTCCGCGACGTCGAGCGCGCGGTCGGCC
AGCCGGTCCGCATGCAGTACTACACACGCGGATTCTCGGCGATCAAGCATGCCAAGGACGGCACGCTCGACATGGTTTTC
GGCCCGGCCCAGGTGATCGCCAACATCGGCAAGTTCAAGTTCGAGCCGATCCTCAAGTCGGGCGAAACGGCCGCGGCGGC
CTTCGTCGCCGGTCCCGCATACAAGGGTCAGCTCGCCGCGCGCTCGGGGGCACGTCTCGGCGTTCCCGACTACGAGTCGC
TGATGGGCGGCATGGCGCGCAGCGAAATCAACAGCCGCGGCCTCAGCAAGCGCGATTTTTCGGAGATCAAGTTCCATCGC
ATGGCGGAAGCGCCGCTGTACGGCTTGAAGCTCGGCCGCTACGACCTCGCGGTCGCGTCGGCCGAGGAGGCGAAAGCGTG
GACGGCAAGCAATGGCGGCCGCATCGTCTTCACGACCGCGGCCGTGCCGCTGCGCGCGCTTTCGGTCCAGCCCGAGCGGG
TGGACGCCGGAATGCGACAGAAGCTCGCGGCCGGGTTGACGAAAAACAACAGCCTTCAGCTTGCGCTCGCCGGCGCGAGC
AAGGCCGACTTCAAGAGCGTCGCGTCGATGCTCAACACCACGCCGACGGTCCTGCCCGGCGCCAAGGTCATCGGCGCCGC
CCAGACGCGCGAGCTGATGGCGCAGGGCGTCCCGGTCTACGACGTGCGGGTCGGCGAGGAATACGCCGTGGCGCACGTCC
CTGGGGCCATCTCGGTGCCCTACAAGGAAGGCAGCGCCAAGGAAGTCGGCTTCGACGCGGCGGACGACCAGTTCGCGCTC
AACAAGCTGCCCAAGGACAAGAACGCGCCCTTCATCATGTATTGCGACGGCACGATCTGCTGGAAGAGCTATAAATCTGC
GGTGATGGCGATCCAGGCCGGCTGGAAGAACGTCTACTGGTTCCGCGGCGGCTTCCCGGAATGGAAGGAAGCCGGCATGC
CCGTGATCGCCCGCAAGGAATAA

Upstream 100 bases:

>100_bases
GCAATGGCTGCACGAGACGACCGCCGCGGATTGAACGAAAACTAAACTTTGTTCGGCCGCAGGCCGTTAATTCCGCACGC
CAATAAGAACGGAGACGATC

Downstream 100 bases:

>100_bases
GCGTCCGCGATGAACTATAAAAACCACACGGGACACAAACAGGCCCTTGTTTTGGTGCGCCAGTTCGATCAAGATTGGCG
CGGGAAGGTCGTTAACCCAT

Product: rhodanese-like protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Methyl-Accepting Chemotaxis Protein Signaling Domain; Rhodanese-Like Protein

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRFTLLPLVLVSALAQAEPLTLGVVLDQNESISDTQTNQRYRAFVRDVERAVGQPVRMQYYTRGFSAIKHAKDGTLDMVF
GPAQVIANIGKFKFEPILKSGETAAAAFVAGPAYKGQLAARSGARLGVPDYESLMGGMARSEINSRGLSKRDFSEIKFHR
MAEAPLYGLKLGRYDLAVASAEEAKAWTASNGGRIVFTTAAVPLRALSVQPERVDAGMRQKLAAGLTKNNSLQLALAGAS
KADFKSVASMLNTTPTVLPGAKVIGAAQTRELMAQGVPVYDVRVGEEYAVAHVPGAISVPYKEGSAKEVGFDAADDQFAL
NKLPKDKNAPFIMYCDGTICWKSYKSAVMAIQAGWKNVYWFRGGFPEWKEAGMPVIARKE

Sequences:

>Translated_380_residues
MRFTLLPLVLVSALAQAEPLTLGVVLDQNESISDTQTNQRYRAFVRDVERAVGQPVRMQYYTRGFSAIKHAKDGTLDMVF
GPAQVIANIGKFKFEPILKSGETAAAAFVAGPAYKGQLAARSGARLGVPDYESLMGGMARSEINSRGLSKRDFSEIKFHR
MAEAPLYGLKLGRYDLAVASAEEAKAWTASNGGRIVFTTAAVPLRALSVQPERVDAGMRQKLAAGLTKNNSLQLALAGAS
KADFKSVASMLNTTPTVLPGAKVIGAAQTRELMAQGVPVYDVRVGEEYAVAHVPGAISVPYKEGSAKEVGFDAADDQFAL
NKLPKDKNAPFIMYCDGTICWKSYKSAVMAIQAGWKNVYWFRGGFPEWKEAGMPVIARKE
>Mature_380_residues
MRFTLLPLVLVSALAQAEPLTLGVVLDQNESISDTQTNQRYRAFVRDVERAVGQPVRMQYYTRGFSAIKHAKDGTLDMVF
GPAQVIANIGKFKFEPILKSGETAAAAFVAGPAYKGQLAARSGARLGVPDYESLMGGMARSEINSRGLSKRDFSEIKFHR
MAEAPLYGLKLGRYDLAVASAEEAKAWTASNGGRIVFTTAAVPLRALSVQPERVDAGMRQKLAAGLTKNNSLQLALAGAS
KADFKSVASMLNTTPTVLPGAKVIGAAQTRELMAQGVPVYDVRVGEEYAVAHVPGAISVPYKEGSAKEVGFDAADDQFAL
NKLPKDKNAPFIMYCDGTICWKSYKSAVMAIQAGWKNVYWFRGGFPEWKEAGMPVIARKE

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41082; Mature: 41082

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTLLPLVLVSALAQAEPLTLGVVLDQNESISDTQTNQRYRAFVRDVERAVGQPVRMQY
CCEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHH
YTRGFSAIKHAKDGTLDMVFGPAQVIANIGKFKFEPILKSGETAAAAFVAGPAYKGQLAA
HHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCEECHHHCCCCCCEEEEEECCCCCCCHHH
RSGARLGVPDYESLMGGMARSEINSRGLSKRDFSEIKFHRMAEAPLYGLKLGRYDLAVAS
CCCCCCCCCCHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEEEEC
AEEAKAWTASNGGRIVFTTAAVPLRALSVQPERVDAGMRQKLAAGLTKNNSLQLALAGAS
CHHHCEEECCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
KADFKSVASMLNTTPTVLPGAKVIGAAQTRELMAQGVPVYDVRVGEEYAVAHVPGAISVP
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCEECC
YKEGSAKEVGFDAADDQFALNKLPKDKNAPFIMYCDGTICWKSYKSAVMAIQAGWKNVYW
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHEECCCCEEEE
FRGGFPEWKEAGMPVIARKE
EECCCCCHHHCCCCEEEECC
>Mature Secondary Structure
MRFTLLPLVLVSALAQAEPLTLGVVLDQNESISDTQTNQRYRAFVRDVERAVGQPVRMQY
CCEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHH
YTRGFSAIKHAKDGTLDMVFGPAQVIANIGKFKFEPILKSGETAAAAFVAGPAYKGQLAA
HHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCEECHHHCCCCCCEEEEEECCCCCCCHHH
RSGARLGVPDYESLMGGMARSEINSRGLSKRDFSEIKFHRMAEAPLYGLKLGRYDLAVAS
CCCCCCCCCCHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEEEEC
AEEAKAWTASNGGRIVFTTAAVPLRALSVQPERVDAGMRQKLAAGLTKNNSLQLALAGAS
CHHHCEEECCCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
KADFKSVASMLNTTPTVLPGAKVIGAAQTRELMAQGVPVYDVRVGEEYAVAHVPGAISVP
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCEECC
YKEGSAKEVGFDAADDQFALNKLPKDKNAPFIMYCDGTICWKSYKSAVMAIQAGWKNVYW
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHEECCCCEEEE
FRGGFPEWKEAGMPVIARKE
EECCCCCHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA