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The map label for this gene is ypfJ [H]

Identifier: 73542979

GI number: 73542979

Start: 3605961

End: 3606923

Strand: Direct

Name: ypfJ [H]

Synonym: Reut_A3296

Alternate gene names: 73542979

Gene position: 3605961-3606923 (Clockwise)

Preceding gene: 73542978

Following gene: 73542987

Centisome position: 94.73

GC content: 64.17

Gene sequence:

>963_bases
ATGGGATGTCGTGCATGCCAGACACGCCAACCCTCATTGCTATACTTCATTCCATCCCCGCTCAAATTCCATTCCCTGGA
GCCACCAATGCGTCTCGATGACGAAGCCGAAAGCCAAAACGTTGAAGACCGCCGTGGCGGCTTTGGCGGTGGCGGGTTCG
GTGGTCCGAAGACCATCGGCATCGGCACCGTCATCATCGCCCTTGCCGCCTCGTATTTCTTCGGCATCGACCCGTCGGTC
ATCATGCAGGGCGCTTCGGTGCTGCAGGGCCAGCAGGCGCCGCAGCAGCAACAGGTCAACCGGCCACCGGCCACTGACAA
GCTGACGGTGTTCACGAAGAAGGTGCTCGGCAATACCGAGCGAACCTGGGAACACATCTTCGAAACCGAGCTCAACCGCC
GCTACGAGCCACCCAAGCTCGTGCTGTTCTCGGGAGCCACGCCGACGGCGTGCGGTACAGGGCAATCAGCCATGGGCCCG
TTCTACTGCCCCGGCGATCACAAGGTCTATATCGACCTGGCCTTCTATGACGAACTGCGCCAGCGCTTCGGCGCCAGCGG
CGACTTCGCGCAGGCCTATGTGATCGCGCATGAAATCGGCCACCATGTGCAGAACCTGCTGGGCGTCTCCGACAAGGTCG
ATGCGGCGCGCCGCCGCATGGGCGAGGCGCAGGCCAACCAGCTTTCGGTGCGGATGGAACTGCAGGCCGATTGCCTGGCG
GGCGTCTGGGCCACCAACGCGCAACGCGCGAACCAGCAGTTGCTGGAGCCTGGCGATATCGAGGAAGGCCTGAAGGCCGC
CGCCGCAATCGGCGACGATCGGCTGCAGCGCCAGGCGCAGGGCTATGTGGTGCCGGAAGCCTTCACGCATGGCACCAGCG
AGCAGCGCGTGCGCTGGCTGCGGCAAGGCCTGACTACCGGCGATATCCGCAAGTGCGACACGTTCGCCGCGCGCCAGCTC
TGA

Upstream 100 bases:

>100_bases
CCGGATGGTGTTGATTGCCGCCCGTCACCCGCCAGTCTCATTGTTGAGGTCTGGCGGGTGGCGTTTTTTGTTTTTGGGGT
ATTGAGAATCGGGATGGTTG

Downstream 100 bases:

>100_bases
GCCTACGGAAGCCACGCGGACGTTGCGGCACGGCCAACCTGCTCAAGCGCCATGAGTCGCAGGCGCAGCGCCATCCAACA
ACAGCGCCGTCAGGAATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MGCRACQTRQPSLLYFIPSPLKFHSLEPPMRLDDEAESQNVEDRRGGFGGGGFGGPKTIGIGTVIIALAASYFFGIDPSV
IMQGASVLQGQQAPQQQQVNRPPATDKLTVFTKKVLGNTERTWEHIFETELNRRYEPPKLVLFSGATPTACGTGQSAMGP
FYCPGDHKVYIDLAFYDELRQRFGASGDFAQAYVIAHEIGHHVQNLLGVSDKVDAARRRMGEAQANQLSVRMELQADCLA
GVWATNAQRANQQLLEPGDIEEGLKAAAAIGDDRLQRQAQGYVVPEAFTHGTSEQRVRWLRQGLTTGDIRKCDTFAARQL

Sequences:

>Translated_320_residues
MGCRACQTRQPSLLYFIPSPLKFHSLEPPMRLDDEAESQNVEDRRGGFGGGGFGGPKTIGIGTVIIALAASYFFGIDPSV
IMQGASVLQGQQAPQQQQVNRPPATDKLTVFTKKVLGNTERTWEHIFETELNRRYEPPKLVLFSGATPTACGTGQSAMGP
FYCPGDHKVYIDLAFYDELRQRFGASGDFAQAYVIAHEIGHHVQNLLGVSDKVDAARRRMGEAQANQLSVRMELQADCLA
GVWATNAQRANQQLLEPGDIEEGLKAAAAIGDDRLQRQAQGYVVPEAFTHGTSEQRVRWLRQGLTTGDIRKCDTFAARQL
>Mature_319_residues
GCRACQTRQPSLLYFIPSPLKFHSLEPPMRLDDEAESQNVEDRRGGFGGGGFGGPKTIGIGTVIIALAASYFFGIDPSVI
MQGASVLQGQQAPQQQQVNRPPATDKLTVFTKKVLGNTERTWEHIFETELNRRYEPPKLVLFSGATPTACGTGQSAMGPF
YCPGDHKVYIDLAFYDELRQRFGASGDFAQAYVIAHEIGHHVQNLLGVSDKVDAARRRMGEAQANQLSVRMELQADCLAG
VWATNAQRANQQLLEPGDIEEGLKAAAAIGDDRLQRQAQGYVVPEAFTHGTSEQRVRWLRQGLTTGDIRKCDTFAARQL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=292, Percent_Identity=49.3150684931507, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 35125; Mature: 34994

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCRACQTRQPSLLYFIPSPLKFHSLEPPMRLDDEAESQNVEDRRGGFGGGGFGGPKTIG
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCHHH
IGTVIIALAASYFFGIDPSVIMQGASVLQGQQAPQQQQVNRPPATDKLTVFTKKVLGNTE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCH
RTWEHIFETELNRRYEPPKLVLFSGATPTACGTGQSAMGPFYCPGDHKVYIDLAFYDELR
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEHHHHHHH
QRFGASGDFAQAYVIAHEIGHHVQNLLGVSDKVDAARRRMGEAQANQLSVRMELQADCLA
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECHHHHH
GVWATNAQRANQQLLEPGDIEEGLKAAAAIGDDRLQRQAQGYVVPEAFTHGTSEQRVRWL
HHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
RQGLTTGDIRKCDTFAARQL
HHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GCRACQTRQPSLLYFIPSPLKFHSLEPPMRLDDEAESQNVEDRRGGFGGGGFGGPKTIG
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCHHH
IGTVIIALAASYFFGIDPSVIMQGASVLQGQQAPQQQQVNRPPATDKLTVFTKKVLGNTE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCH
RTWEHIFETELNRRYEPPKLVLFSGATPTACGTGQSAMGPFYCPGDHKVYIDLAFYDELR
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEEEHHHHHHH
QRFGASGDFAQAYVIAHEIGHHVQNLLGVSDKVDAARRRMGEAQANQLSVRMELQADCLA
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEECHHHHH
GVWATNAQRANQQLLEPGDIEEGLKAAAAIGDDRLQRQAQGYVVPEAFTHGTSEQRVRWL
HHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHCCCHHHHHHHH
RQGLTTGDIRKCDTFAARQL
HHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]