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The map label for this gene is yraN [C]

Identifier: 73542948

GI number: 73542948

Start: 3575581

End: 3575964

Strand: Reverse

Name: yraN [C]

Synonym: Reut_A3265

Alternate gene names: 73542948

Gene position: 3575964-3575581 (Counterclockwise)

Preceding gene: 73542950

Following gene: 73542947

Centisome position: 93.94

GC content: 68.75

Gene sequence:

>384_bases
TTGATTCCATCATTCAAAAGCACGACGCAGGCACGCGGCGCGCTGGCTGAGGACCGCGCGCTCGCTCACCTGCAGCGGCA
CGGCCTGCAGCCCGTGGTGCGCAATTATCGCTGCAAAGGCGGCGAGATCGACCTGGTCATGCGCGCGCCGGACGGCACGC
TGGTATTTATAGAAGTGCGCCAGCGCAGCGCGAGCGCGTTTGGCGGCGCCGCGGCCAGCGTGACGCCGGCCAAGCAGCGG
CGCGTGGTCCTGGCGGCTCTGCACTACCTGTCTACGCTGGCGCAGCAGCCGCCGTGCCGGTTCGACGTGGTAGCGCTGGC
GCCGGGCAGGCTCGAATGGCTGCAGCATGCGTTCGATCTCGACACAGCCGGCGAGGCAGGCTGA

Upstream 100 bases:

>100_bases
TCCGCCACATTGCCGATCGGAGTCGCCACGATATACAGCGTGCCGGCCGGGTACGACTGGCCGGCCGCCAGCGAGATCCA
GTCACTCATGAGAACTTCCG

Downstream 100 bases:

>100_bases
GTGGGGCTCGGCGGCCGCGCTGGTTCATAATGCGCGGTAACGCGGCCCGTGCCGCGACAGCAACAACAAGGCCCCCTCGA
GCGATGAGCATCGAAAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIPSFKSTTQARGALAEDRALAHLQRHGLQPVVRNYRCKGGEIDLVMRAPDGTLVFIEVRQRSASAFGGAAASVTPAKQR
RVVLAALHYLSTLAQQPPCRFDVVALAPGRLEWLQHAFDLDTAGEAG

Sequences:

>Translated_127_residues
MIPSFKSTTQARGALAEDRALAHLQRHGLQPVVRNYRCKGGEIDLVMRAPDGTLVFIEVRQRSASAFGGAAASVTPAKQR
RVVLAALHYLSTLAQQPPCRFDVVALAPGRLEWLQHAFDLDTAGEAG
>Mature_127_residues
MIPSFKSTTQARGALAEDRALAHLQRHGLQPVVRNYRCKGGEIDLVMRAPDGTLVFIEVRQRSASAFGGAAASVTPAKQR
RVVLAALHYLSTLAQQPPCRFDVVALAPGRLEWLQHAFDLDTAGEAG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=115, Percent_Identity=40, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3265_CUPPJ (Q46W60)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_297468.1
- ProteinModelPortal:   Q46W60
- GeneID:   3609104
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A3265
- NMPDR:   fig|264198.3.peg.3753
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   PRK14673
- BioCyc:   REUT264198:REUT_A3265-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13734; Mature: 13734

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSFKSTTQARGALAEDRALAHLQRHGLQPVVRNYRCKGGEIDLVMRAPDGTLVFIEVR
CCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEC
QRSASAFGGAAASVTPAKQRRVVLAALHYLSTLAQQPPCRFDVVALAPGRLEWLQHAFDL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCC
DTAGEAG
CCCCCCC
>Mature Secondary Structure
MIPSFKSTTQARGALAEDRALAHLQRHGLQPVVRNYRCKGGEIDLVMRAPDGTLVFIEVR
CCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEC
QRSASAFGGAAASVTPAKQRRVVLAALHYLSTLAQQPPCRFDVVALAPGRLEWLQHAFDL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCC
DTAGEAG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA