| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is pulE [H]
Identifier: 73542914
GI number: 73542914
Start: 3541955
End: 3543430
Strand: Direct
Name: pulE [H]
Synonym: Reut_A3230
Alternate gene names: 73542914
Gene position: 3541955-3543430 (Clockwise)
Preceding gene: 73542913
Following gene: 73542915
Centisome position: 93.05
GC content: 67.62
Gene sequence:
>1476_bases ATGGCGGCGCGCCTGGTGTCGTACAGCTTTGCACGCGAAGCGCCGCTGCTGATCGCGCACCAGCGCGCCGACGGCCTTGA AGTCTGGGTGAGCCGCGCCACATCGCCCGCTGCGCTTGCGGAGGTGGCGCGCGTGCACGGCGCGCTGCGCCTGCGCGTGA TGGAGCCCGATGCGCTCGAACGCGCCATGTCCGACGCCTACAACCGCCAGGACGGCAGCGCCGCGCAGGTGGTGGGCGAA GTCGAAGGCGAAGTCGACCTGTCGCGCCTGATGCAGGACATTCCCGCTGTGGAAGATCTGCTCGAGTCCGAAGACGACGC GCCGATCATCCGCATGATCAACGCGCTGCTCACACAGGCCGCGCGCGAAGGCGCATCGGACATCCACATCGAACCGTTCG AATCGGCGTCGGTCGTGCGCTTCCGTGTCGACGGCACGCTGCGCGACGTGGTGCGGCCGAAGAAGGCGCTGCACGGCGCG CTGATCTCGCGCATCAAGATCATGGCGCAGCTCGATATTGCCGAGAAACGCTTGCCGCAGGACGGCCGGATCACGCTGCG CGTGGGCGGGCGCCCCGTGGATGTGCGCGTGTCCACGCTGCCGACGGGCCACGGCGAGCGCGCGGTGCTGCGTCTGCTGG ACAAGGAGGCAGGCCGCCTCGACCTGGCCAAGCTCGGCATGTCGCCGCGCACGCTGGCCGGTTTCGACGACCTGATCCGC CAGCCGCACGGCATCGTGCTCGTTACCGGGCCGACAGGCTCGGGCAAGACCACTACGCTGTATGCGGCGCTATCTCGGCT GGACGCGCGCTCCACCAACATCATGACGGTGGAGGATCCGATCGAATACGACCTCGACGGCATCGGCCAGACGCAGGTCA ACGCGCGTATCGACATGACCTTCGCCAAGGCCCTGCGCGCGATCCTGCGCCAGGACCCGGACGTGGTGATGATCGGCGAA ATCCGCGACCTGGAAACCGCGCAGATCGCGGTGCAGGCTTCGCTGACCGGCCACCTAGTGCTGGCCACGCTGCACACCAA TGACTCGGCCTCGGCGATCACGCGGCTCGTGGACATGGGCATCGAGCCGTTCCTGCTGTCGTCGTCGCTGCTTGGCGTGC TCGCGCAGCGGCTCGTACGCCGGTTGTGCCCGCATTGCAAGCGCGAGGAAGTCATCGAAGTCACCGCCGGCGAAGCCGAA ACGCTGCATACGCAAGGCAAGCCGCTACAACACCTGTGGCATGCGGTGGGCTGCGACAAGTGCGGCAACTCCGGCTACCA GGGCCGCATGGGCGTGTACGAGCTGCTGACCGTCGACGACGAGATCCGCACGATGATCCACCGCCAGCAGCCCGAGTCGG AGATCAAGCAGGTCGCGCTTGCTCATGGCATGCAGACCATGCGCGGCGATGCGCAGCGCTGGATCGACACCGGCGCCACC GCGCTCGAAGAAGTGCTGCGCGTCACGCGCGACTGA
Upstream 100 bases:
>100_bases CGGCATCGCCCGACGCCGGCCGCCGTAACTGAGCCAGACCATGGCAAGCGAAGTCCAAGCCGCCCTTGACAGCCAGGATA TTCAGGAGCCGCCGTCACCG
Downstream 100 bases:
>100_bases CGGAACGCCGCCATGCCCGCCTTCCGCTACGAAGCCGCCGACGCCCTGGGCAAGACCGACCGCGGCGTCATCGAGGCCGA CAGCCCGCGGCAGGCGCGCT
Product: type II secretion system protein E (GspE)
Products: NA
Alternate protein names: Pullulanase secretion protein pulE; Type II traffic warden ATPase [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MAARLVSYSFAREAPLLIAHQRADGLEVWVSRATSPAALAEVARVHGALRLRVMEPDALERAMSDAYNRQDGSAAQVVGE VEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFESASVVRFRVDGTLRDVVRPKKALHGA LISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDLAKLGMSPRTLAGFDDLIR QPHGIVLVTGPTGSGKTTTLYAALSRLDARSTNIMTVEDPIEYDLDGIGQTQVNARIDMTFAKALRAILRQDPDVVMIGE IRDLETAQIAVQASLTGHLVLATLHTNDSASAITRLVDMGIEPFLLSSSLLGVLAQRLVRRLCPHCKREEVIEVTAGEAE TLHTQGKPLQHLWHAVGCDKCGNSGYQGRMGVYELLTVDDEIRTMIHRQQPESEIKQVALAHGMQTMRGDAQRWIDTGAT ALEEVLRVTRD
Sequences:
>Translated_491_residues MAARLVSYSFAREAPLLIAHQRADGLEVWVSRATSPAALAEVARVHGALRLRVMEPDALERAMSDAYNRQDGSAAQVVGE VEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFESASVVRFRVDGTLRDVVRPKKALHGA LISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDLAKLGMSPRTLAGFDDLIR QPHGIVLVTGPTGSGKTTTLYAALSRLDARSTNIMTVEDPIEYDLDGIGQTQVNARIDMTFAKALRAILRQDPDVVMIGE IRDLETAQIAVQASLTGHLVLATLHTNDSASAITRLVDMGIEPFLLSSSLLGVLAQRLVRRLCPHCKREEVIEVTAGEAE TLHTQGKPLQHLWHAVGCDKCGNSGYQGRMGVYELLTVDDEIRTMIHRQQPESEIKQVALAHGMQTMRGDAQRWIDTGAT ALEEVLRVTRD >Mature_490_residues AARLVSYSFAREAPLLIAHQRADGLEVWVSRATSPAALAEVARVHGALRLRVMEPDALERAMSDAYNRQDGSAAQVVGEV EGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFESASVVRFRVDGTLRDVVRPKKALHGAL ISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDLAKLGMSPRTLAGFDDLIRQ PHGIVLVTGPTGSGKTTTLYAALSRLDARSTNIMTVEDPIEYDLDGIGQTQVNARIDMTFAKALRAILRQDPDVVMIGEI RDLETAQIAVQASLTGHLVLATLHTNDSASAITRLVDMGIEPFLLSSSLLGVLAQRLVRRLCPHCKREEVIEVTAGEAET LHTQGKPLQHLWHAVGCDKCGNSGYQGRMGVYELLTVDDEIRTMIHRQQPESEIKQVALAHGMQTMRGDAQRWIDTGATA LEEVLRVTRD
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of pullulanase [H]
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP E family [H]
Homologues:
Organism=Escherichia coli, GI1789723, Length=430, Percent_Identity=53.953488372093, Blast_Score=471, Evalue=1e-134, Organism=Escherichia coli, GI1786296, Length=416, Percent_Identity=44.2307692307692, Blast_Score=328, Evalue=5e-91, Organism=Escherichia coli, GI87082188, Length=195, Percent_Identity=43.0769230769231, Blast_Score=122, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR013369 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E [H]
EC number: NA
Molecular weight: Translated: 53743; Mature: 53612
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00662 T2SP_E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARLVSYSFAREAPLLIAHQRADGLEVWVSRATSPAALAEVARVHGALRLRVMEPDALE CCCHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHH RAMSDAYNRQDGSAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQA HHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHH AREGASDIHIEPFESASVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQ HHCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDLAKLGMSPRTLAGFDDLIR CCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEHHHCCCCCCHHCCHHHHHC QPHGIVLVTGPTGSGKTTTLYAALSRLDARSTNIMTVEDPIEYDLDGIGQTQVNARIDMT CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEECCEEHHH FAKALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAITRLVDMG HHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEEEEEEEECCCHHHHHHHHHHCC IEPFLLSSSLLGVLAQRLVRRLCPHCKREEVIEVTAGEAETLHTQGKPLQHLWHAVGCDK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHCHHH CGNSGYQGRMGVYELLTVDDEIRTMIHRQQPESEIKQVALAHGMQTMRGDAQRWIDTGAT CCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ALEEVLRVTRD HHHHHHHHHCC >Mature Secondary Structure AARLVSYSFAREAPLLIAHQRADGLEVWVSRATSPAALAEVARVHGALRLRVMEPDALE CCHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHH RAMSDAYNRQDGSAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQA HHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHH AREGASDIHIEPFESASVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQ HHCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDLAKLGMSPRTLAGFDDLIR CCEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEHHHCCCCCCHHCCHHHHHC QPHGIVLVTGPTGSGKTTTLYAALSRLDARSTNIMTVEDPIEYDLDGIGQTQVNARIDMT CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEECCEEHHH FAKALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAITRLVDMG HHHHHHHHHHCCCCEEEECCCCCCCHHHEEEEEECCCEEEEEEEECCCHHHHHHHHHHCC IEPFLLSSSLLGVLAQRLVRRLCPHCKREEVIEVTAGEAETLHTQGKPLQHLWHAVGCDK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHCHHH CGNSGYQGRMGVYELLTVDDEIRTMIHRQQPESEIKQVALAHGMQTMRGDAQRWIDTGAT CCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ALEEVLRVTRD HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1738317; 2677007 [H]