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The map label for this gene is xcpS [H]

Identifier: 73542915

GI number: 73542915

Start: 3543443

End: 3544660

Strand: Direct

Name: xcpS [H]

Synonym: Reut_A3231

Alternate gene names: 73542915

Gene position: 3543443-3544660 (Clockwise)

Preceding gene: 73542914

Following gene: 73542917

Centisome position: 93.09

GC content: 66.75

Gene sequence:

>1218_bases
ATGCCCGCCTTCCGCTACGAAGCCGCCGACGCCCTGGGCAAGACCGACCGCGGCGTCATCGAGGCCGACAGCCCGCGGCA
GGCGCGCTCGCAACTGCGCGCGCGCGGGCTGACGCCGCTGACGGTCGATCCGCTCGCTGGTACTGGGCAGGCCCCGCGCA
GCGGCAGCCAGCTTTTCACGCGCCGGCTTTCCACGCAGGAACAGGCACTGTTCACGCGCCAGCTCGCGAGCCTGATCGTC
TCGGGCCTGCCGCTCGACGAAGCGCTCGGCGCGCTGGCTGACCAGGCCGAGCGGCCCTATGTCCACGAGCTGCTCGCCGG
CATTCGCGCCGAGGTCATGGGTGGCAGCTCGCTGTCGGTGGCCCTGGCCCAGCATCCGCGCGATTTTCCCGATATCTACC
GTGCACTGGTTTCCGCCGGCGAGCACTCCGGCCACCTCGGGCTGGTGCTCGAGCGGCTGGCCGGCTACATCGAATCGCGC
AATGCGCTGACGTCCAAGATCCGGCTGGCCTTCACCTATCCGGCGATCGTCACGGTGGTGGCATTTGCGATCGTGATCTT
CCTGCTGTCGTATGTGGTGCCGCAGGTGGTCAGCGTGTTCGCCAACACCAAGCAGAAGCTGCCGACGCTGACGATTGTCA
TGCTGGCGCTGTCGGATTTCGTGCGGAACTGGTGGTGGGCGGCGCTGGCGGTGATCGCCGTGATCGCCATGATCGTGCGC
AGCCTGCTCAAGCAGCCGGCTGTTCGGCTGGAGTGGCACCGCTGGCTGCTGACGGCGCCGCTGATCGGCAAACTGACCCG
CGGCTACAACACCGCGCGCTTCGCCGGCACGCTGGCGATTCTGGTGTCGGCTGGGGTGCCGATCCTGCGGAGCCTGCAGG
CGGCTGGGGAGACGCTGACCAATGAAGCGCTACGGGCCAATGTCGAAGACGCGACGACACGCGTGCGGGAAGGCGCGTCG
CTCGCGCGGGCGCTGGCCGCGCAGAACCAGTTTCCGCCCGTGCTGGTGCATTTGATTCGCTCTGGCGAGGCGACCGGGAA
TTTGCCGGTGATGCTCGATCGCGCGGCTCAGGGCGAGGCGCAGGAACTGGAGCGGCGGACGCTGTTTCTTACCAGTCTGC
TGGAGCCGCTGTTGATCTTGACGATGGGTGTTGTGGTGCTGCTGATTGTCTTGGCGGTGTTGATGCCGATTATTGAGATC
AATCAGCTGGTGAGATAG

Upstream 100 bases:

>100_bases
CATGCAGACCATGCGCGGCGATGCGCAGCGCTGGATCGACACCGGCGCCACCGCGCTCGAAGAAGTGCTGCGCGTCACGC
GCGACTGACGGAACGCCGCC

Downstream 100 bases:

>100_bases
GGCTTTGGCGGGCTGGCATGCGCCAAGCGCCGCCAAAAGCATCCCAACCCCTCAACTCTTGACCTTCCTCCGCGTCTTCC
TCACGGGTTTCGCCTCAGAG

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPAFRYEAADALGKTDRGVIEADSPRQARSQLRARGLTPLTVDPLAGTGQAPRSGSQLFTRRLSTQEQALFTRQLASLIV
SGLPLDEALGALADQAERPYVHELLAGIRAEVMGGSSLSVALAQHPRDFPDIYRALVSAGEHSGHLGLVLERLAGYIESR
NALTSKIRLAFTYPAIVTVVAFAIVIFLLSYVVPQVVSVFANTKQKLPTLTIVMLALSDFVRNWWWAALAVIAVIAMIVR
SLLKQPAVRLEWHRWLLTAPLIGKLTRGYNTARFAGTLAILVSAGVPILRSLQAAGETLTNEALRANVEDATTRVREGAS
LARALAAQNQFPPVLVHLIRSGEATGNLPVMLDRAAQGEAQELERRTLFLTSLLEPLLILTMGVVVLLIVLAVLMPIIEI
NQLVR

Sequences:

>Translated_405_residues
MPAFRYEAADALGKTDRGVIEADSPRQARSQLRARGLTPLTVDPLAGTGQAPRSGSQLFTRRLSTQEQALFTRQLASLIV
SGLPLDEALGALADQAERPYVHELLAGIRAEVMGGSSLSVALAQHPRDFPDIYRALVSAGEHSGHLGLVLERLAGYIESR
NALTSKIRLAFTYPAIVTVVAFAIVIFLLSYVVPQVVSVFANTKQKLPTLTIVMLALSDFVRNWWWAALAVIAVIAMIVR
SLLKQPAVRLEWHRWLLTAPLIGKLTRGYNTARFAGTLAILVSAGVPILRSLQAAGETLTNEALRANVEDATTRVREGAS
LARALAAQNQFPPVLVHLIRSGEATGNLPVMLDRAAQGEAQELERRTLFLTSLLEPLLILTMGVVVLLIVLAVLMPIIEI
NQLVR
>Mature_404_residues
PAFRYEAADALGKTDRGVIEADSPRQARSQLRARGLTPLTVDPLAGTGQAPRSGSQLFTRRLSTQEQALFTRQLASLIVS
GLPLDEALGALADQAERPYVHELLAGIRAEVMGGSSLSVALAQHPRDFPDIYRALVSAGEHSGHLGLVLERLAGYIESRN
ALTSKIRLAFTYPAIVTVVAFAIVIFLLSYVVPQVVSVFANTKQKLPTLTIVMLALSDFVRNWWWAALAVIAVIAMIVRS
LLKQPAVRLEWHRWLLTAPLIGKLTRGYNTARFAGTLAILVSAGVPILRSLQAAGETLTNEALRANVEDATTRVREGASL
ARALAAQNQFPPVLVHLIRSGEATGNLPVMLDRAAQGEAQELERRTLFLTSLLEPLLILTMGVVVLLIVLAVLMPIIEIN
QLVR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=401, Percent_Identity=37.1571072319202, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI1786295, Length=398, Percent_Identity=26.6331658291457, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43942; Mature: 43811

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFRYEAADALGKTDRGVIEADSPRQARSQLRARGLTPLTVDPLAGTGQAPRSGSQLFT
CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHH
RRLSTQEQALFTRQLASLIVSGLPLDEALGALADQAERPYVHELLAGIRAEVMGGSSLSV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
ALAQHPRDFPDIYRALVSAGEHSGHLGLVLERLAGYIESRNALTSKIRLAFTYPAIVTVV
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAIVIFLLSYVVPQVVSVFANTKQKLPTLTIVMLALSDFVRNWWWAALAVIAVIAMIVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLKQPAVRLEWHRWLLTAPLIGKLTRGYNTARFAGTLAILVSAGVPILRSLQAAGETLT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NEALRANVEDATTRVREGASLARALAAQNQFPPVLVHLIRSGEATGNLPVMLDRAAQGEA
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCH
QELERRTLFLTSLLEPLLILTMGVVVLLIVLAVLMPIIEINQLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAFRYEAADALGKTDRGVIEADSPRQARSQLRARGLTPLTVDPLAGTGQAPRSGSQLFT
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHH
RRLSTQEQALFTRQLASLIVSGLPLDEALGALADQAERPYVHELLAGIRAEVMGGSSLSV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHH
ALAQHPRDFPDIYRALVSAGEHSGHLGLVLERLAGYIESRNALTSKIRLAFTYPAIVTVV
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAIVIFLLSYVVPQVVSVFANTKQKLPTLTIVMLALSDFVRNWWWAALAVIAVIAMIVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLKQPAVRLEWHRWLLTAPLIGKLTRGYNTARFAGTLAILVSAGVPILRSLQAAGETLT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NEALRANVEDATTRVREGASLARALAAQNQFPPVLVHLIRSGEATGNLPVMLDRAAQGEA
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCH
QELERRTLFLTSLLEPLLILTMGVVVLLIVLAVLMPIIEINQLVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]