| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is recG [H]
Identifier: 73542491
GI number: 73542491
Start: 3074869
End: 3077055
Strand: Reverse
Name: recG [H]
Synonym: Reut_A2806
Alternate gene names: 73542491
Gene position: 3077055-3074869 (Counterclockwise)
Preceding gene: 73542497
Following gene: 73542490
Centisome position: 80.84
GC content: 68.54
Gene sequence:
>2187_bases ATGCCCGGAACCGCCACCGAACCCACCGAGGACAAAGCCGAAGCCCCCGACTCAGCGCCGTCCGCGAAGGCCAAGGCAGC GGGCAAGGCTGGGAGCAAGGCGACGGGCAAGGACAGCAAGCCATCGTCCGCCGTCGCGCGGCTCGCCAAGATGGGGCTGC GGCGCAGCGTCGACCTCGTGCTGCATCTGCCGATGCGCTACGAGGACGAAACCACGCTGATGCCGATCGCTGAAGCCATC CGCCGCTCCGGGCTCGGCCAGCCGGCACAGGTCGAAGGCGAAGTGATTTCCAATGAAGTCACGTTCCGCCCGCGTCGCCA GCTCGTCGTGAAGATCGCTGACGACAGCGGCGAACTCACGCTGCGCTTCCTGAATTTCTACGGCAGCCAGACCAAGCAGA TGGAAGAGGGCGTGCGCCTGCGCGTGCGCGGCGAGGTCCGCGGCGGCTTCTTCGGGGCCGAGATGGTGCACCCGACGGTG CGGCCGGTCGCACCGGATGAGCCCTTGCCGGACCGGCTCACGCCCGTCTATCCCGCCACGGCCGGTATTTCGCAAGCCTA TCTGCGCAAAGCCATCTCCGGCGCGCTAGCGCGTACGCCCTTGCCCGAGACGCTGCCCCCCGCCGTGCTCGAAGGCCCCG TCGCAAAGCTAAAGCTGCGCCCGCTCGCCGAATCCCTGCGCCTGCTGCATACGCCGCCACCGCAGGAAAGCGAGGCGGCA CTGGCCGACCGGTCGCATCCGGCCTGGCAGCGCATCAAGTTTGATGAACTGCTCGCTCAGCAGATTTCCTTGCGGCGTGC CCACGAGGCGCGGCGCGAAAAGAACGCGCCATCGATGCCCCGGCAGGAAGGCGGCCTGCTCACGCGCTTCCTGGCCGCAC TGCCGTTCCGCCTGACCGGCGCCCAGCAGCGCGTCGTCGAGGAAATCGCGGCCGACATGACCGCGCAGCACCCGATGCAC CGTCTGCTGCAGGGCGACGTGGGCAGCGGCAAGACCATCGTCGCGGCGCTGGCCGCGTGCCAGGCCATCGACGCCGGCTA CCAGGCCGCGATCATGGCGCCGACGGAAATCCTGGCCGAGCAGCACTATCGCAAGCTGTCGGCGTGGCTCGAGCCGCTGG GCGTGCCGGTGGTATGGCTCGCCGGCAGCCTCAAGGCGCGCGAGAAGCGCGAGGCCGTGGCTCGCGTGGAGTCAGGGGAA GCGCGGCTAGCCATCGGCACGCATGCGCTGATCCAGGACACCGTGCGCTTCGCCAGGCTGGGCTTGTCAGTGGTGGACGA GCAGCACCGCTTCGGCGTCGCGCAGCGGCTGGCGTTGCGTGGCAAGGCCGGCAGCGCGGAGCCTGCTCAAACTGCCCCGG ACACCGTCCCCCACCAGCTGATGATGTCGGCCACGCCGATTCCCCGCACGCTGGCCATGACGTATTACGCCGACCTCGAC GTATCCGTGATCGACGAATTGCCGCCGGGCCGCACGCCGATCGTCACGCGCCTGGTCAATGACGAGCGGCGTGACGAAGT CATCGACCGTATCCACCATGCCGCCGCAGAAGGGCGCCAGGTCTACTGGGTCTGCCCGCTGATCGAGGAAAGCGAAGCCC TGCAGCTCCAGACCGCGGTGGAAACCTATGAAACGCTGGTCGCCGCGCTGCCGGACCTGCGCGTCGGCCTGGTCCACGGC CGCCTGCCGCCGGCCGAGAAGGCGTCCGTGATGGACGATTTCAGCGCCAACCGCCTGCAGGTGCTGGTGGCGACGACGGT GATCGAAGTCGGCGTAGATGTACCCAATGCCTCGTTGATGGTGATCGAGCATGCCGAGCGTTTCGGCCTCGCGCAGCTCC ACCAGTTGCGCGGCCGCGTCGGGCGGGGCACCGCGGAGTCCGTCTGCCTGCTGATGTACCAGGCGCCGCTGTCGCCCACG GCGCGCGAGCGCCTTGCGACCATGCGCGAGACGACCGACGGCTTCGAGATCGCGCGGCGCGACCTCGATATCCGCGGGCC AGGCGAATTTCTCGGTGCGCGACAGTCCGGTGAAGCGATGCTTCGCTTCGCCGACCTGAACACCGATGCGTGGCTCGTCG AATATGCTCGGGAAGCCGCACAGGTGATGCTTGCGCAGTTTCCTGAGGCGGTGGAGGCGCATCTGTCGCGCTGGCTCGGC GGGCGCGAGCACTACCTGAAGGCCTGA
Upstream 100 bases:
>100_bases GGATAGGTACAATCGGCGAATCCGATATTGTAAGGCTTGGGCGCCAGGCGCCGCCCGGCCCGGTGTGATCCCCCTTATTT CTCCGCCCGCCCGATTACCG
Downstream 100 bases:
>100_bases GCTACGGCTCTTTTTGACGACGCAGTGGCCTGTTCGCCGCATTCGCGCGGCGTTCTGACAGATTCGGGAATCGAAGGTAA AATCTATCGCCTACCGCACA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 728; Mature: 727
Protein sequence:
>728_residues MPGTATEPTEDKAEAPDSAPSAKAKAAGKAGSKATGKDSKPSSAVARLAKMGLRRSVDLVLHLPMRYEDETTLMPIAEAI RRSGLGQPAQVEGEVISNEVTFRPRRQLVVKIADDSGELTLRFLNFYGSQTKQMEEGVRLRVRGEVRGGFFGAEMVHPTV RPVAPDEPLPDRLTPVYPATAGISQAYLRKAISGALARTPLPETLPPAVLEGPVAKLKLRPLAESLRLLHTPPPQESEAA LADRSHPAWQRIKFDELLAQQISLRRAHEARREKNAPSMPRQEGGLLTRFLAALPFRLTGAQQRVVEEIAADMTAQHPMH RLLQGDVGSGKTIVAALAACQAIDAGYQAAIMAPTEILAEQHYRKLSAWLEPLGVPVVWLAGSLKAREKREAVARVESGE ARLAIGTHALIQDTVRFARLGLSVVDEQHRFGVAQRLALRGKAGSAEPAQTAPDTVPHQLMMSATPIPRTLAMTYYADLD VSVIDELPPGRTPIVTRLVNDERRDEVIDRIHHAAAEGRQVYWVCPLIEESEALQLQTAVETYETLVAALPDLRVGLVHG RLPPAEKASVMDDFSANRLQVLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAESVCLLMYQAPLSPT ARERLATMRETTDGFEIARRDLDIRGPGEFLGARQSGEAMLRFADLNTDAWLVEYAREAAQVMLAQFPEAVEAHLSRWLG GREHYLKA
Sequences:
>Translated_728_residues MPGTATEPTEDKAEAPDSAPSAKAKAAGKAGSKATGKDSKPSSAVARLAKMGLRRSVDLVLHLPMRYEDETTLMPIAEAI RRSGLGQPAQVEGEVISNEVTFRPRRQLVVKIADDSGELTLRFLNFYGSQTKQMEEGVRLRVRGEVRGGFFGAEMVHPTV RPVAPDEPLPDRLTPVYPATAGISQAYLRKAISGALARTPLPETLPPAVLEGPVAKLKLRPLAESLRLLHTPPPQESEAA LADRSHPAWQRIKFDELLAQQISLRRAHEARREKNAPSMPRQEGGLLTRFLAALPFRLTGAQQRVVEEIAADMTAQHPMH RLLQGDVGSGKTIVAALAACQAIDAGYQAAIMAPTEILAEQHYRKLSAWLEPLGVPVVWLAGSLKAREKREAVARVESGE ARLAIGTHALIQDTVRFARLGLSVVDEQHRFGVAQRLALRGKAGSAEPAQTAPDTVPHQLMMSATPIPRTLAMTYYADLD VSVIDELPPGRTPIVTRLVNDERRDEVIDRIHHAAAEGRQVYWVCPLIEESEALQLQTAVETYETLVAALPDLRVGLVHG RLPPAEKASVMDDFSANRLQVLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAESVCLLMYQAPLSPT ARERLATMRETTDGFEIARRDLDIRGPGEFLGARQSGEAMLRFADLNTDAWLVEYAREAAQVMLAQFPEAVEAHLSRWLG GREHYLKA >Mature_727_residues PGTATEPTEDKAEAPDSAPSAKAKAAGKAGSKATGKDSKPSSAVARLAKMGLRRSVDLVLHLPMRYEDETTLMPIAEAIR RSGLGQPAQVEGEVISNEVTFRPRRQLVVKIADDSGELTLRFLNFYGSQTKQMEEGVRLRVRGEVRGGFFGAEMVHPTVR PVAPDEPLPDRLTPVYPATAGISQAYLRKAISGALARTPLPETLPPAVLEGPVAKLKLRPLAESLRLLHTPPPQESEAAL ADRSHPAWQRIKFDELLAQQISLRRAHEARREKNAPSMPRQEGGLLTRFLAALPFRLTGAQQRVVEEIAADMTAQHPMHR LLQGDVGSGKTIVAALAACQAIDAGYQAAIMAPTEILAEQHYRKLSAWLEPLGVPVVWLAGSLKAREKREAVARVESGEA RLAIGTHALIQDTVRFARLGLSVVDEQHRFGVAQRLALRGKAGSAEPAQTAPDTVPHQLMMSATPIPRTLAMTYYADLDV SVIDELPPGRTPIVTRLVNDERRDEVIDRIHHAAAEGRQVYWVCPLIEESEALQLQTAVETYETLVAALPDLRVGLVHGR LPPAEKASVMDDFSANRLQVLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAESVCLLMYQAPLSPTA RERLATMRETTDGFEIARRDLDIRGPGEFLGARQSGEAMLRFADLNTDAWLVEYAREAAQVMLAQFPEAVEAHLSRWLGG REHYLKA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=689, Percent_Identity=50.0725689404935, Blast_Score=610, Evalue=1e-176, Organism=Escherichia coli, GI1787357, Length=393, Percent_Identity=37.4045801526718, Blast_Score=237, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 79550; Mature: 79419
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTATEPTEDKAEAPDSAPSAKAKAAGKAGSKATGKDSKPSSAVARLAKMGLRRSVDLV CCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE LHLPMRYEDETTLMPIAEAIRRSGLGQPAQVEGEVISNEVTFRPRRQLVVKIADDSGELT EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCEE LRFLNFYGSQTKQMEEGVRLRVRGEVRGGFFGAEMVHPTVRPVAPDEPLPDRLTPVYPAT EEEHHHHCCHHHHHHCCCEEEEEEECCCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCCC AGISQAYLRKAISGALARTPLPETLPPAVLEGPVAKLKLRPLAESLRLLHTPPPQESEAA CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH LADRSHPAWQRIKFDELLAQQISLRRAHEARREKNAPSMPRQEGGLLTRFLAALPFRLTG HHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC AQQRVVEEIAADMTAQHPMHRLLQGDVGSGKTIVAALAACQAIDAGYQAAIMAPTEILAE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHH QHYRKLSAWLEPLGVPVVWLAGSLKAREKREAVARVESGEARLAIGTHALIQDTVRFARL HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH GLSVVDEQHRFGVAQRLALRGKAGSAEPAQTAPDTVPHQLMMSATPIPRTLAMTYYADLD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEEEEEECCC VSVIDELPPGRTPIVTRLVNDERRDEVIDRIHHAAAEGRQVYWVCPLIEESEALQLQTAV HHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH ETYETLVAALPDLRVGLVHGRLPPAEKASVMDDFSANRLQVLVATTVIEVGVDVPNASLM HHHHHHHHHCCCHHEEHEECCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCEE VIEHAERFGLAQLHQLRGRVGRGTAESVCLLMYQAPLSPTARERLATMRETTDGFEIARR EEECHHHHHHHHHHHHHHHCCCCCHHHHEEHEEECCCCHHHHHHHHHHHHCCCHHHHHHH DLDIRGPGEFLGARQSGEAMLRFADLNTDAWLVEYAREAAQVMLAQFPEAVEAHLSRWLG CCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC GREHYLKA CCHHHCCC >Mature Secondary Structure PGTATEPTEDKAEAPDSAPSAKAKAAGKAGSKATGKDSKPSSAVARLAKMGLRRSVDLV CCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE LHLPMRYEDETTLMPIAEAIRRSGLGQPAQVEGEVISNEVTFRPRRQLVVKIADDSGELT EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCEE LRFLNFYGSQTKQMEEGVRLRVRGEVRGGFFGAEMVHPTVRPVAPDEPLPDRLTPVYPAT EEEHHHHCCHHHHHHCCCEEEEEEECCCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCCC AGISQAYLRKAISGALARTPLPETLPPAVLEGPVAKLKLRPLAESLRLLHTPPPQESEAA CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH LADRSHPAWQRIKFDELLAQQISLRRAHEARREKNAPSMPRQEGGLLTRFLAALPFRLTG HHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCC AQQRVVEEIAADMTAQHPMHRLLQGDVGSGKTIVAALAACQAIDAGYQAAIMAPTEILAE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHH QHYRKLSAWLEPLGVPVVWLAGSLKAREKREAVARVESGEARLAIGTHALIQDTVRFARL HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH GLSVVDEQHRFGVAQRLALRGKAGSAEPAQTAPDTVPHQLMMSATPIPRTLAMTYYADLD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEEEEEECCC VSVIDELPPGRTPIVTRLVNDERRDEVIDRIHHAAAEGRQVYWVCPLIEESEALQLQTAV HHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH ETYETLVAALPDLRVGLVHGRLPPAEKASVMDDFSANRLQVLVATTVIEVGVDVPNASLM HHHHHHHHHCCCHHEEHEECCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCEE VIEHAERFGLAQLHQLRGRVGRGTAESVCLLMYQAPLSPTARERLATMRETTDGFEIARR EEECHHHHHHHHHHHHHHHCCCCCHHHHEEHEEECCCCHHHHHHHHHHHHCCCHHHHHHH DLDIRGPGEFLGARQSGEAMLRFADLNTDAWLVEYAREAAQVMLAQFPEAVEAHLSRWLG CCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC GREHYLKA CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]