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The map label for this gene is oxyR [H]

Identifier: 73542490

GI number: 73542490

Start: 3073808

End: 3074758

Strand: Reverse

Name: oxyR [H]

Synonym: Reut_A2805

Alternate gene names: 73542490

Gene position: 3074758-3073808 (Counterclockwise)

Preceding gene: 73542491

Following gene: 73542489

Centisome position: 80.78

GC content: 62.15

Gene sequence:

>951_bases
ATGACGCTCACCGAACTGAAGTACATCGTCGCCGTGGCGCGAGAGCGCCATTTCGGCCGTGCTGCCGAAGCGTGCTTCGT
ATCGCAGCCGACCCTGTCGGTGGCGATCAAGAAGCTGGAAGACGAACTCAACGTGCAGATCTTCGAGCGCGGCACCTCGG
AGGTCTCCGTGACCTCCGTCGGCGAGCAGATCGTGGCCCAGGCCCAGCGCGTGCTCGAACAGACCATGGCCATCCGCGAG
ATTGCCAAACAGGGCAAGGACCCGCTGGCCGGTCCGCTGCGAGTCGGTGTGATCTACACGATCGGGCCGTACCTGCTGCC
GGCCCTGGTCAAGCAGATGATCGAGAACGTACCGCAGATGCCGCTGATGCTGCAGGAGAACTACACGGTCAAGCTGATCG
AACTGCTCAAGCAGGGCGAGATCGATTGCGCGATCATGGCTGAGCCGTTTGCCGATTCCGGTCTCACTGTGCGGCCGCTC
TATGACGAACCTTTCGTCGTTGCCGTGCCGCGCGGGCACCAGCTTGCGCAGGTCAGCCATGTTGATCCGGATGAGCTGAA
GCAGCAGACCATGCTGCTGCTTGGTAGCGGGCATTGCTTCCGTGATCATGTGCTTGGCGTTTGCCCCGAGCTGTCGCGCT
TCTCGCAGGCGTCGGACGGGATCCAGAAGACGTTTGAAGGCTCGTCCCTCGAGACCATTCGCCATATGGTGGCGAGCGGC
GTAGGAATAACCGTGCTGCCGCGCACGTCTGTGCCGGATATGAAGGCCAAGGGCGATATGCTGGCCTATGTGCCGTTTGC
CGAGCCCGTACCTGACCGGCGCGTGGTATTGGCCTGGCGGAAGAGTTTTACGCGGCTGCCAGCTATGGAGGCGTTGGCGA
ACGCGGTGGCGGCGTGTGAATTGCCGGGGGTCAGGAAGTTGAATGCCAAGGAGTTGGCTGAGGCGGCTTGA

Upstream 100 bases:

>100_bases
TTTTTGACGACGCAGTGGCCTGTTCGCCGCATTCGCGCGGCGTTCTGACAGATTCGGGAATCGAAGGTAAAATCTATCGC
CTACCGCACATTGATAAGTC

Downstream 100 bases:

>100_bases
CGGGTTGTCGTTCTTGGCGGCGCCGCTATTTCGTCGGCGTAGCCGGCGACCTGCTTGCAGCCGCGTAGAGTCAGGAAATC
GGGCGCGGGCGCCTGCCAGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTSVGEQIVAQAQRVLEQTMAIRE
IAKQGKDPLAGPLRVGVIYTIGPYLLPALVKQMIENVPQMPLMLQENYTVKLIELLKQGEIDCAIMAEPFADSGLTVRPL
YDEPFVVAVPRGHQLAQVSHVDPDELKQQTMLLLGSGHCFRDHVLGVCPELSRFSQASDGIQKTFEGSSLETIRHMVASG
VGITVLPRTSVPDMKAKGDMLAYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACELPGVRKLNAKELAEAA

Sequences:

>Translated_316_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTSVGEQIVAQAQRVLEQTMAIRE
IAKQGKDPLAGPLRVGVIYTIGPYLLPALVKQMIENVPQMPLMLQENYTVKLIELLKQGEIDCAIMAEPFADSGLTVRPL
YDEPFVVAVPRGHQLAQVSHVDPDELKQQTMLLLGSGHCFRDHVLGVCPELSRFSQASDGIQKTFEGSSLETIRHMVASG
VGITVLPRTSVPDMKAKGDMLAYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACELPGVRKLNAKELAEAA
>Mature_315_residues
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTSVGEQIVAQAQRVLEQTMAIREI
AKQGKDPLAGPLRVGVIYTIGPYLLPALVKQMIENVPQMPLMLQENYTVKLIELLKQGEIDCAIMAEPFADSGLTVRPLY
DEPFVVAVPRGHQLAQVSHVDPDELKQQTMLLLGSGHCFRDHVLGVCPELSRFSQASDGIQKTFEGSSLETIRHMVASGV
GITVLPRTSVPDMKAKGDMLAYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACELPGVRKLNAKELAEAA

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=298, Percent_Identity=38.9261744966443, Blast_Score=211, Evalue=5e-56,
Organism=Escherichia coli, GI1788748, Length=298, Percent_Identity=29.1946308724832, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI145693105, Length=292, Percent_Identity=28.7671232876712, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI157672245, Length=304, Percent_Identity=27.9605263157895, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367136, Length=272, Percent_Identity=27.9411764705882, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787530, Length=255, Percent_Identity=28.6274509803922, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787879, Length=293, Percent_Identity=27.3037542662116, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788887, Length=288, Percent_Identity=26.3888888888889, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87082132, Length=297, Percent_Identity=25.2525252525253, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787601, Length=174, Percent_Identity=30.4597701149425, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788296, Length=252, Percent_Identity=27.3809523809524, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1788481, Length=303, Percent_Identity=24.4224422442244, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1786401, Length=262, Percent_Identity=26.7175572519084, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87081904, Length=179, Percent_Identity=32.9608938547486, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790208, Length=149, Percent_Identity=32.2147651006711, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790262, Length=266, Percent_Identity=25.5639097744361, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788297, Length=251, Percent_Identity=25.4980079681275, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787806, Length=281, Percent_Identity=20.9964412811388, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34627; Mature: 34496

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTSV
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCCCEEHHHH
GEQIVAQAQRVLEQTMAIREIAKQGKDPLAGPLRVGVIYTIGPYLLPALVKQMIENVPQM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTVKLIELLKQGEIDCAIMAEPFADSGLTVRPLYDEPFVVAVPRGHQLAQVSH
CEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCHHCCC
VDPDELKQQTMLLLGSGHCFRDHVLGVCPELSRFSQASDGIQKTFEGSSLETIRHMVASG
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VGITVLPRTSVPDMKAKGDMLAYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACE
CCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHC
LPGVRKLNAKELAEAA
CCCCCCCCHHHHHHCC
>Mature Secondary Structure 
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTSV
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCCCEEHHHH
GEQIVAQAQRVLEQTMAIREIAKQGKDPLAGPLRVGVIYTIGPYLLPALVKQMIENVPQM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTVKLIELLKQGEIDCAIMAEPFADSGLTVRPLYDEPFVVAVPRGHQLAQVSH
CEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCHHCCC
VDPDELKQQTMLLLGSGHCFRDHVLGVCPELSRFSQASDGIQKTFEGSSLETIRHMVASG
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VGITVLPRTSVPDMKAKGDMLAYVPFAEPVPDRRVVLAWRKSFTRLPAMEALANAVAACE
CCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHC
LPGVRKLNAKELAEAA
CCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA