| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is dps [C]
Identifier: 73542489
GI number: 73542489
Start: 3073055
End: 3073540
Strand: Reverse
Name: dps [C]
Synonym: Reut_A2804
Alternate gene names: 73542489
Gene position: 3073540-3073055 (Counterclockwise)
Preceding gene: 73542490
Following gene: 73542488
Centisome position: 80.74
GC content: 60.7
Gene sequence:
>486_bases ATGGCAAAGAAGAATGAGATGAGCGTGAACATCGGCATTTCCGACAAGGACCGCAAGAAGATCGCGGAAGGCCTGTCGAA GCTGCTGGCTGACACCTACACCCTCTACCTCAAGACCCATAACTTCCACTGGAACGTGACGGGTCCCATGTTCAACACGC TGCATCTGATGTTCGAGACGCAGTACAACGAACTGGCGCTGGCCGTCGATTCCATCGCCGAGCGCATCCGCGCGCTGGGC TATCCGGCTCCGGGCACCTACAAGGAATACGCGCGTCTGTCGTCGATCCAGGAAGAGGAAGGCGTGCCGGAAGCGACCGA AATGATCCGCAAGCTCGTCGAAGGCCAGGAAGCCGTGGTGCGCACCGCGCGCTCGATCTTCCCGCTGGTCGATGCCGCCA GCGACGAACCGTCGGCCGACCTGCTGACCCAGCGCATGCAGACACACGAAAAGACTGCGTGGATGCTGCGCTCGATGCTG GCCTGA
Upstream 100 bases:
>100_bases GTAATGCAATAATGTCGGGGTTATGCCACCCAGCGCGGGTTGGGCTGCCCTTGGGCGGCGACCCATGCTTTCCCAGTTTT CCGAACGGAGCGTAATCACC
Downstream 100 bases:
>100_bases TGGCCATCTGATCCCCATGCTGCCCCAACGCGCCGCAACCGTCCTGGCTGCGGCGCGTTTTCGTTCGATGGGCGCTGTCC GTTGAACGCGTGCTCCTCCG
Product: Ferritin and Dps
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAKKNEMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALAVDSIAERIRALG YPAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEAVVRTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSML A
Sequences:
>Translated_161_residues MAKKNEMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALAVDSIAERIRALG YPAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEAVVRTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSML A >Mature_160_residues AKKNEMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFETQYNELALAVDSIAERIRALGY PAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEAVVRTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSMLA
Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18208; Mature: 18077
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKNEMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFET CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCHHHHHHHHHHHC QYNELALAVDSIAERIRALGYPAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEAVV CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH RTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSMLA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AKKNEMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMFET CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCHHHHHHHHHHHC QYNELALAVDSIAERIRALGYPAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEAVV CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH RTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSMLA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]