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The map label for this gene is recO

Identifier: 73541937

GI number: 73541937

Start: 2482906

End: 2483781

Strand: Reverse

Name: recO

Synonym: Reut_A2250

Alternate gene names: 73541937

Gene position: 2483781-2482906 (Counterclockwise)

Preceding gene: 73541938

Following gene: 73541936

Centisome position: 65.25

GC content: 68.84

Gene sequence:

>876_bases
ATGCCTGACTTCGCGCGTGGGCCTGCGAAGGCCCGCCGCGCCGATCCGGTCGTGGACGAGGCCGCGGAGCTGCTGGACAG
CCGCGCGCTGCCCGGCATGGCCGACGCTGCCGGCCGCGCGATGATGGACCGCGCGATGCGCATCGTGCCGGCGCGCAGCG
AAACCCGCGTGTCGGAGCAGCCGGGCTTCGTGCTGCATGCCTGGCCGTATCGCGAGACCAGCCTGATCCTCGATGTCTTT
ACGCGCGACCACGGGCGGCTGTCGATGGTTGCCAAGGGCGCCAAGCGGCCGCATTCGGCGCTGCGTCCTGTGCTGCAGCA
CTTCCATCCGATCTCCCTGTCGTGGAGCGGCCGCGGCGAGGTCAAGACGCTGACGCGCGCCGAGTGGGTCGGCGGCATGC
CGCCGCTGGCCGGCGATGCGCTGCTGTCCGCGTTCTACCTCAACGAACTGCTGATGCGGTTCTGCCCGCGCGAGGACGGC
CATCCGGCGCTGTTCCGGCACTACATGGCGACGCTCACGCGTCTGGCGCACGGCGAGGCCGCAGGTCTGGTGCTGCGCAG
CTTCGAGCGTGTGCTGCTGCAGGAAACCGGCTTTGCAGTGGCCTTCGACCAGTGCCTGAGCACAGGGGAGCGCGTGCAGC
CGCATCTGGACTATGTCTACCAGCCCGAGCGCGGTGTGCGCCGGGCCCAGCCGAGCGATCCGTCGTCGTGGCCCGTGGTG
TCGGGCCAGACCTTGCTCGACATGTCGCAGGACGATTACGGGCGCGCGCAGACCGCTCTGCAAAGCCGCGCGCTGATGCG
CTTCCTTCTGCATTATTATTTGCAGGGAGCGCCGCTCAAGACGCGGCAGATCCTGATCGACCTGCACTATCTCTGA

Upstream 100 bases:

>100_bases
TGTTCGACGGCAAGGTCTACCTGGAAATGTGGATCAAGGTGAAAAGCGGCTGGGCCGATAACGAAGCCGGACTGCGCGCA
TACGGCTACGAGTGAGCAAA

Downstream 100 bases:

>100_bases
CCCGCCGGGCAGCCGGCCCACCGCTGATTCCGCAAGCATGATCTTCCACGCAAATCCGGGCGTCATCGACCTCGGCATCA
ACATCGACCACGTCGCCACG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPDFARGPAKARRADPVVDEAAELLDSRALPGMADAAGRAMMDRAMRIVPARSETRVSEQPGFVLHAWPYRETSLILDVF
TRDHGRLSMVAKGAKRPHSALRPVLQHFHPISLSWSGRGEVKTLTRAEWVGGMPPLAGDALLSAFYLNELLMRFCPREDG
HPALFRHYMATLTRLAHGEAAGLVLRSFERVLLQETGFAVAFDQCLSTGERVQPHLDYVYQPERGVRRAQPSDPSSWPVV
SGQTLLDMSQDDYGRAQTALQSRALMRFLLHYYLQGAPLKTRQILIDLHYL

Sequences:

>Translated_291_residues
MPDFARGPAKARRADPVVDEAAELLDSRALPGMADAAGRAMMDRAMRIVPARSETRVSEQPGFVLHAWPYRETSLILDVF
TRDHGRLSMVAKGAKRPHSALRPVLQHFHPISLSWSGRGEVKTLTRAEWVGGMPPLAGDALLSAFYLNELLMRFCPREDG
HPALFRHYMATLTRLAHGEAAGLVLRSFERVLLQETGFAVAFDQCLSTGERVQPHLDYVYQPERGVRRAQPSDPSSWPVV
SGQTLLDMSQDDYGRAQTALQSRALMRFLLHYYLQGAPLKTRQILIDLHYL
>Mature_290_residues
PDFARGPAKARRADPVVDEAAELLDSRALPGMADAAGRAMMDRAMRIVPARSETRVSEQPGFVLHAWPYRETSLILDVFT
RDHGRLSMVAKGAKRPHSALRPVLQHFHPISLSWSGRGEVKTLTRAEWVGGMPPLAGDALLSAFYLNELLMRFCPREDGH
PALFRHYMATLTRLAHGEAAGLVLRSFERVLLQETGFAVAFDQCLSTGERVQPHLDYVYQPERGVRRAQPSDPSSWPVVS
GQTLLDMSQDDYGRAQTALQSRALMRFLLHYYLQGAPLKTRQILIDLHYL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=229, Percent_Identity=38.8646288209607, Blast_Score=140, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_CUPPJ (Q46Z20)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_296457.1
- ProteinModelPortal:   Q46Z20
- GeneID:   3610593
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A2250
- NMPDR:   fig|264198.3.peg.2853
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- BioCyc:   REUT264198:REUT_A2250-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 32626; Mature: 32495

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFARGPAKARRADPVVDEAAELLDSRALPGMADAAGRAMMDRAMRIVPARSETRVSEQ
CCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCC
PGFVLHAWPYRETSLILDVFTRDHGRLSMVAKGAKRPHSALRPVLQHFHPISLSWSGRGE
CCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCC
VKTLTRAEWVGGMPPLAGDALLSAFYLNELLMRFCPREDGHPALFRHYMATLTRLAHGEA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHH
AGLVLRSFERVLLQETGFAVAFDQCLSTGERVQPHLDYVYQPERGVRRAQPSDPSSWPVV
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCEEECCCHHHHCCCCCCCCCCCEE
SGQTLLDMSQDDYGRAQTALQSRALMRFLLHYYLQGAPLKTRQILIDLHYL
CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECC
>Mature Secondary Structure 
PDFARGPAKARRADPVVDEAAELLDSRALPGMADAAGRAMMDRAMRIVPARSETRVSEQ
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCC
PGFVLHAWPYRETSLILDVFTRDHGRLSMVAKGAKRPHSALRPVLQHFHPISLSWSGRGE
CCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCC
VKTLTRAEWVGGMPPLAGDALLSAFYLNELLMRFCPREDGHPALFRHYMATLTRLAHGEA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHH
AGLVLRSFERVLLQETGFAVAFDQCLSTGERVQPHLDYVYQPERGVRRAQPSDPSSWPVV
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCEEECCCHHHHCCCCCCCCCCCEE
SGQTLLDMSQDDYGRAQTALQSRALMRFLLHYYLQGAPLKTRQILIDLHYL
CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA